RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 A0A1B0GW64 132 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 PRR33A8MZF0 331 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 NAPSAO96009 420 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 SPEM2Q0P670 501 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 RSPO4Q2I0M5 234 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 RPL39P5Q59GN2 51 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 CRISPLD2Q9H0B8 497 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 BEX4Q9NWD9 120 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 SCN2AQ99250 2005 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 CEACAM1P13688 526 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 C1orf194Q5T5A4 169 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 EBLN2Q6P2I7 272 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 OSR1Q8TAX0 266 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 MIR17HGQ75NE6 70 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 ZNF257Q9Y2Q1 563 aa9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 MDC1Q14676 2089 aaKnown RBP9.01□□□□□ -0.97
CLTCL1-209ENST00000617103 AHRRA9YTQ3 701 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 LYPD3O95274 346 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 CACNG8Q8WXS5 425 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 GNB1LQ9BYB4 327 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 TMEM74BQ9NUR3 256 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 COL24A1Q17RW2 1714 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 MYO16Q9Y6X6 1858 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 LINC00614P0C842 121 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 OR10J3Q5JRS4 329 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 FMC1Q96HJ9 113 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 RNASE7Q9H1E1 156 aaKnown RBP9□□□□□ -0.97
CLTCL1-209ENST00000617103 STRCP1A6NGW2 1772 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 A0A1W2PQM1 296 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 FAM106CPP0CH98 169 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 KIF26BQ2KJY2 2108 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 Q5PR19 223 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 ORMDL3Q8N138 153 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 OR4X2Q8NGF9 303 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 IGKV1D-13A0A0B4J2D9 117 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 IGKV1-9A0A0C4DH69 117 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 NDUFS6O75380 124 aaKnown RBP9□□□□□ -0.97
CLTCL1-209ENST00000617103 IGKV1-13P0DP09 117 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 PCOLCEQ15113 449 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 PEAR1Q5VY43 1037 aaPredicted RBP9□□□□□ -0.97
CLTCL1-209ENST00000617103 UNQ5815/PRO19632Q6UWF5 114 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 C10orf126Q8N4M7 172 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 ZNF436-AS1Q8NC38 126 aaPredicted RBP9□□□□□ -0.97
CLTCL1-209ENST00000617103 OR52E5Q8NH55 327 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 ZNF71Q9NQZ8 489 aaPredicted RBP9□□□□□ -0.97
CLTCL1-209ENST00000617103 AKAP6Q13023 2319 aa9□□□□□ -0.97
CLTCL1-209ENST00000617103 TRAV1-1A0A0B4J248 108 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TSPAN13O95857 204 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TEX38Q6PEX7 206 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TMEM144Q7Z5S9 345 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 SLC25A45Q8N413 288 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 OR5A1Q8NGJ0 315 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 OCC1Q8TAD7 63 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 FOXC2Q99958 501 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 REPIN1Q9BWE0 567 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 A6NNC1 897 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 CIARTQ8N365 385 aaPredicted RBP8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 SMRP1Q8NCR6 262 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 C1QTNF5Q9BXJ0 243 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 CHODLQ9H9P2 273 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TGFBR3LH3BV60 316 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 WNT9BO14905 357 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TYMSP04818 313 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 COX6A1P12074 109 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 LHFPL1Q86WI0 220 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 OR2K2Q8NGT1 345 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 FNDC4Q9H6D8 234 aaPredicted RBP8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TDRD15B5MCY1 1934 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 IGKV3D-11A0A0A0MRZ8 115 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 TRAV24A0A0B4J272 114 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 CCL1P22362 96 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 KLRB1Q12918 225 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 NRN1LQ496H8 165 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 PNKDQ8N490 385 aa8.99□□□□□ -0.97
CLTCL1-209ENST00000617103 FOXI3A8MTJ6 420 aaPredicted RBP8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 PATE3B3GLJ2 98 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 GPX1P07203 203 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 ACP7Q6ZNF0 438 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 ZNRF1Q8ND25 227 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 PGPEP1LA6NFU8 196 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 C1orf185Q5T7R7 199 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 WDR82Q6UXN9 313 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 SHISA5Q8N114 240 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 GTF3AQ92664 365 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 ST20Q9HBF5 79 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 PPP1R17O96001 155 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 SEC11AP67812 179 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 FOXC1Q12948 553 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 SIGMAR1Q99720 223 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 A0A1W2PRE2 83 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 SUPT4H1P63272 117 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 ORAOV1Q8WV07 137 aa8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
CLTCL1-209ENST00000617103 CEP250Q9BV73 2442 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 NPIPB11E5RHQ5 1161 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 DNAL4O96015 105 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms