RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 HSPB9Q9BQS6 159 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 HINT2Q9BX68 163 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 OR51J1Q9H342 316 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 CACNG5Q9UF02 275 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 OR51B2Q9Y5P1 312 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 ALG5Q9Y673 324 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 IGHV7-81A0A0B4J1V7 117 aa11.65□□□□□ -0.54
UBXN1-218ENST00000616865 TRAV3A0A0B4J244 114 aa11.65□□□□□ -0.54
UBXN1-218ENST00000616865 FAM25EA8MYX2 175 aa11.65□□□□□ -0.54
UBXN1-218ENST00000616865 IGHG2P01859 326 aa11.65□□□□□ -0.54
UBXN1-218ENST00000616865 RPL27AP46776 148 aaKnown RBP11.65□□□□□ -0.54
UBXN1-218ENST00000616865 SMCO1Q147U7 214 aa11.65□□□□□ -0.54
UBXN1-218ENST00000616865 OR1S1Q8NH92 325 aa11.65□□□□□ -0.54
UBXN1-218ENST00000616865 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.54
UBXN1-218ENST00000616865 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
UBXN1-218ENST00000616865 TSSC4Q9Y5U2 329 aaPredicted RBP11.65□□□□□ -0.54
UBXN1-218ENST00000616865 A0A0G2JRQ6 117 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 A0A1B0GU03 582 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 C13orf42A0A1B0GVH6 325 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 WI2-2373I1.2A0A1W2PRP0 233 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 TCRBV4S1A1TA0A5B7 111 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 C5orf51A6NDU8 294 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 C15orf61A6NNL5 157 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 AP4M1O00189 453 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 ADAP1O75689 374 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 IFNA17P01571 189 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 TMEM267Q0VDI3 215 aaPredicted RBP11.64□□□□□ -0.55
UBXN1-218ENST00000616865 CENPVQ7Z7K6 275 aaPredicted RBP11.64□□□□□ -0.55
UBXN1-218ENST00000616865 OR4X2Q8NGF9 303 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 OR1L8Q8NGR8 309 aa11.64□□□□□ -0.55
UBXN1-218ENST00000616865 FOXA2Q9Y261 457 aaPredicted RBP11.64□□□□□ -0.55
UBXN1-218ENST00000616865 C7orf66A4D0T2 115 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 IL6RP08887 468 aaPredicted RBP11.63□□□□□ -0.55
UBXN1-218ENST00000616865 FGF2P09038 288 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 P0C879 139 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 TRAPPC2P0DI81 140 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 TRAPPC2BP0DI82 140 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 EGFEM1PQ0D2K5 195 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 NMSQ5H8A3 153 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 DEFB121Q5J5C9 76 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 GSG1LQ6UXU4 331 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 MRPL41Q8IXM3 137 aaKnown RBP11.63□□□□□ -0.55
UBXN1-218ENST00000616865 SRSF12Q8WXF0 261 aaKnown RBP11.63□□□□□ -0.55
UBXN1-218ENST00000616865 QTRT1Q9BXR0 403 aaKnown RBP11.63□□□□□ -0.55
UBXN1-218ENST00000616865 GON7Q9BXV9 100 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 MED28Q9H204 178 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 ENY2Q9NPA8 101 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 CACFD1Q9UGQ2 172 aa11.63□□□□□ -0.55
UBXN1-218ENST00000616865 A0A0B4J293 547 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 TEX50A0A1B0GTY4 177 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 MSGN1A6NI15 193 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 CCSO14618 274 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 GOSR2O14653 212 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 SLC25A6P12236 298 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 MYOD1P15172 320 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 IAH1Q2TAA2 248 aaPredicted RBP11.62□□□□□ -0.55
UBXN1-218ENST00000616865 KHDC1LQ5JSQ8 128 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 OR5B3Q8NH48 314 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 FAM103A1Q9BTL3 118 aaKnown RBP11.62□□□□□ -0.55
UBXN1-218ENST00000616865 TMEM14BQ9NUH8 114 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 GSKIPQ9P0R6 139 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 LINC00527Q9UJ94 153 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 WSB1Q9Y6I7 421 aa11.62□□□□□ -0.55
UBXN1-218ENST00000616865 TRAV41A0A0B4J266 112 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 LINC01548A6NM66 108 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 DBX1A6NMT0 343 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 NXPH3O95157 252 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 HOXD3P31249 432 aaPredicted RBP11.61□□□□□ -0.55
UBXN1-218ENST00000616865 HSPE1P61604 102 aaKnown RBP11.61□□□□□ -0.55
UBXN1-218ENST00000616865 SLC35B1P78383 322 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 CD69Q07108 199 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 MRGPRG-AS1Q2M3A8 158 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 C10orf99Q6UWK7 81 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 Q6ZRM9 215 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 ZNF429Q86V71 674 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 LINC00482Q8N8I6 264 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 WWC2-AS2Q96NR7 200 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 COA4Q9NYJ1 87 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 MGAT4CQ9UBM8 478 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 ZNF257Q9Y2Q1 563 aa11.61□□□□□ -0.55
UBXN1-218ENST00000616865 A0A1W2PN81 502 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 WRBO00258 174 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 APELAP0DMC3 54 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 CHRNA7P36544 502 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 HOXA1P49639 335 aaPredicted RBP11.6□□□□□ -0.55
UBXN1-218ENST00000616865 SPCS3P61009 180 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 NDPQ00604 133 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 STPG2Q8N412 459 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 LFNGQ8NES3 379 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 DPF1Q92782 380 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 C2orf50Q96LR7 162 aa11.6□□□□□ -0.55
UBXN1-218ENST00000616865 NOL4LQ96MY1 436 aaPredicted RBP11.6□□□□□ -0.55
UBXN1-218ENST00000616865 B9D2Q9BPU9 175 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms