RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FBLN7Q53RD9 439 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 RASL11AQ6T310 242 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 BHLHA9Q7RTU4 235 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 PMCHL2Q9BQD1 86 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 MTFP1Q9UDX5 166 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 M0R2P5 195 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 HSPB1P04792 205 aaKnown RBP10.75□□□□□ -0.69
TCF4-248ENST00000616053 SPRED3Q2MJR0 410 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 JPT1Q9UK76 154 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 A0A0J9YW62 118 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 ITGB1BP1O14713 200 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 ARL14EPLP0DKL9 152 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 FGF12P61328 243 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 FAM186AA6NE01 2351 aa10.75□□□□□ -0.69
TCF4-248ENST00000616053 TCRBV5S2A0A599 114 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 B4DSR2 109 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 CT62P0C5K7 136 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 MRPL32Q9BYC8 188 aaKnown RBP10.74□□□□□ -0.69
TCF4-248ENST00000616053 NAV1Q8NEY1 1877 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 ATXN8Q156A1 80 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 TXNDC17Q9BRA2 123 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 CEP290O15078 2479 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 C1orf53Q5VUE5 145 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 MED13LQ71F56 2210 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 DRAM1Q8N682 238 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 LOC101059948A0A1B0GTJ6 334 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 CRYBB3P26998 211 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 NCMAPQ5T1S8 102 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 TCRAP04437 139 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 PKIAP61925 76 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 PRDM6Q9NQX0 595 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 PILRBQ9UKJ0 227 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 IGKV1D-42A0A075B6H8 117 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 AWAT1Q58HT5 328 aa10.74□□□□□ -0.69
TCF4-248ENST00000616053 SLC25A16P16260 332 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 HMGCLL1Q8TB92 370 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 NCKAP5O14513 1909 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 RHOGP84095 191 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 TNFRSF9Q07011 255 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 DNAJC30Q96LL9 226 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 ARHGAP32A7KAX9 2087 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 PTGDSP41222 190 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 SFTA2Q6UW10 78 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 FER1L6-AS1Q8NA97 138 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 LINC00614P0C842 121 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 COX11Q9Y6N1 276 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 ANKRD26Q9UPS8 1709 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 GCAP28676 217 aa10.73□□□□□ -0.69
TCF4-248ENST00000616053 MRPL18Q9H0U6 180 aaKnown RBP10.73□□□□□ -0.69
TCF4-248ENST00000616053 MSGN1A6NI15 193 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 MARCH11A6NNE9 402 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 C1QAP02745 245 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 GLRXP35754 106 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 PAX8Q06710 450 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 KLF5Q13887 457 aaPredicted RBP10.72□□□□□ -0.69
TCF4-248ENST00000616053 NFAT5O94916 1531 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 H3BQ15 152 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 FAM3BP58499 235 aaPredicted RBP10.72□□□□□ -0.69
TCF4-248ENST00000616053 C19orf24Q9BVV8 132 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 SPCS1Q9Y6A9 102 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 PRB3Q04118 309 aaPredicted RBP10.72□□□□□ -0.69
TCF4-248ENST00000616053 C21orf62-AS1Q17RA5 79 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 GTF3AQ92664 365 aaKnown RBP10.72□□□□□ -0.69
TCF4-248ENST00000616053 ISOC2Q96AB3 205 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 SDHCQ99643 169 aaPredicted RBP10.72□□□□□ -0.69
TCF4-248ENST00000616053 CD5P06127 495 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 SP5Q6BEB4 398 aaPredicted RBP10.72□□□□□ -0.69
TCF4-248ENST00000616053 VKORC1Q9BQB6 163 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 CXCL16Q9H2A7 254 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 CCL1P22362 96 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 CYP2G1PQ6ZSU1 146 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 SPACA3Q8IXA5 215 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 SRIP30626 198 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 NRG4Q8WWG1 115 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
TCF4-248ENST00000616053 NBR2O15453 112 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 TNFSF13O75888 250 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 MMP23AO75900 390 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 DUTP33316 252 aaKnown RBP10.71□□□□□ -0.69
TCF4-248ENST00000616053 IL20Q9NYY1 176 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 DOCK3Q8IZD9 2030 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 GAGE2EQ4V326 116 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 PPLO60437 1756 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 SELLP14151 372 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 FCN3O75636 299 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 ID3Q02535 119 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
TCF4-248ENST00000616053 CD24P25063 80 aa10.71□□□□□ -0.7
TCF4-248ENST00000616053 PARD6GQ9BYG4 376 aaPredicted RBP10.71□□□□□ -0.7
TCF4-248ENST00000616053 FOXJ2Q9P0K8 574 aa10.71□□□□□ -0.7
TCF4-248ENST00000616053 GLIPR1P48060 266 aa10.71□□□□□ -0.7
TCF4-248ENST00000616053 SCAND1P57086 179 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms