RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 METRNQ9UJH8 293 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 PKDREJQ9NTG1 2253 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 PMS2P5A8MQ11 134 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 ZNF83P51522 516 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 LYSMD4Q5XG99 296 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 Q6P435 159 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 TREML4Q6UXN2 200 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 WDR86Q86TI4 376 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 ZNF645Q8N7E2 425 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 LINC00479Q96M42 142 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 SLC35D1Q9NTN3 355 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 PCNX2A6NKB5 2137 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 M0R1X1 148 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 YPEL1O60688 119 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 HSBP1O75506 76 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 HAND1O96004 215 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 COMPP49747 757 aaPredicted RBP10.95□□□□□ -0.66
MSH6-214ENST00000616033 PLGLB1Q02325 96 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 C1orf174Q8IYL3 243 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 YPEL2Q96QA6 119 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 COL5A1P20908 1838 aaPredicted RBP10.95□□□□□ -0.66
MSH6-214ENST00000616033 A0A1W2PS18 150 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 HELTA6NFD8 242 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 KLF7O75840 302 aaPredicted RBP10.95□□□□□ -0.66
MSH6-214ENST00000616033 MAGEA5P43359 124 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 RPL39P5Q59GN2 51 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 ZNF497Q6ZNH5 498 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 MIR17HGQ75NE6 70 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 SLC24A4Q8NFF2 622 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 MGST2Q99735 147 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 GTSF1LQ9H1H1 148 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 ARL2-SNX15V9GYD0 113 aa10.95□□□□□ -0.66
MSH6-214ENST00000616033 SH2D7A6NKC9 451 aaPredicted RBP10.94□□□□□ -0.66
MSH6-214ENST00000616033 C22orf46C9J442 243 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 GCHFRP30047 84 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 CYB561P49447 251 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 OR2M7Q8NG81 312 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 SARAFQ96BY9 339 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 TECRQ9NZ01 308 aaKnown RBP10.94□□□□□ -0.66
MSH6-214ENST00000616033 INTS1Q8N201 2190 aaKnown RBP10.94□□□□□ -0.66
MSH6-214ENST00000616033 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.94□□□□□ -0.66
MSH6-214ENST00000616033 J3QT63 122 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 MDP1Q86V88 176 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 CXorf1O96002 111 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 IGLC2P0DOY2 106 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 IGLC3P0DOY3 106 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 FABP6P51161 128 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 ACSF3Q4G176 576 aaPredicted RBP10.94□□□□□ -0.66
MSH6-214ENST00000616033 OR1N2Q8NGR9 330 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 OR2Y1Q8NGV0 311 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 ORAOV1Q8WV07 137 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
MSH6-214ENST00000616033 POM121L2Q96KW2 1035 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 RTL8AQ9BWD3 113 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 PCED1AQ9H1Q7 454 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 CACNA1HO95180 2353 aa10.94□□□□□ -0.66
MSH6-214ENST00000616033 A0A1W2PN81 502 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 AHRRA9YTQ3 701 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 K7ESF4 209 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 NUDT3O95989 172 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 USF1P22415 310 aaPredicted RBP10.93□□□□□ -0.66
MSH6-214ENST00000616033 GPR12P47775 334 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 YPEL3P61236 119 aaPredicted RBP10.93□□□□□ -0.66
MSH6-214ENST00000616033 RPL24P83731 157 aaKnown RBP10.93□□□□□ -0.66
MSH6-214ENST00000616033 STUMQ69YW2 141 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 KCNE4Q8WWG9 221 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 GMPPAQ96IJ6 420 aaPredicted RBP10.93□□□□□ -0.66
MSH6-214ENST00000616033 PMCHL2Q9BQD1 86 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 WDR83OSQ9Y284 106 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 IGFBP2P18065 325 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 TRAT1Q6PIZ9 186 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 COLCA1Q6ZS62 124 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 OR13A1Q8NGR1 328 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 IGHV2OR16-5A0A0B4J2B6 119 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 PIGBOS1A0A0B4J2F0 54 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 FAM90A26D6RGX4 464 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 M0R2Z0 102 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 FOXA3P55318 350 aaPredicted RBP10.93□□□□□ -0.66
MSH6-214ENST00000616033 LGALS4P56470 323 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 GABRA6Q16445 453 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 MLANAQ16655 118 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 TIGITQ495A1 244 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 NIT1Q86X76 327 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 GGTLC1Q9BX51 225 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 CLEC7AQ9BXN2 247 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 PCNX1Q96RV3 2341 aa10.93□□□□□ -0.66
MSH6-214ENST00000616033 PTPRZ1P23471 2315 aaPredicted RBP10.92□□□□□ -0.66
MSH6-214ENST00000616033 TMEM30CPA0ZSE6 113 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 OR5B21A6NL26 309 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 K7ERU9 68 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 TMPRSS2O15393 492 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 LYZL6O75951 148 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 ARG2P78540 354 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 DEFB127Q9H1M4 99 aa10.92□□□□□ -0.66
MSH6-214ENST00000616033 GSX1Q9H4S2 264 aaPredicted RBP10.92□□□□□ -0.66
MSH6-214ENST00000616033 ZNF331Q9NQX6 463 aaPredicted RBP10.92□□□□□ -0.66
MSH6-214ENST00000616033 MFAP2P55001 183 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms