RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 DEFB108BQ8NET1 73 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 RPP21Q9H633 154 aaKnown RBP7.99□□□□□ -1.13
COL12A1-211ENST00000615798 TNFRSF18Q9Y5U5 241 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 ZSWIM8A7E2V4 1837 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 KLRC4-KLRK1H3BQV0 150 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 CD5P06127 495 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 C1QL4Q86Z23 238 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 R3HDMLQ9H3Y0 253 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 SRFP11831 508 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 PLEKHB2Q96CS7 222 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 RETNQ9HD89 108 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 GREB1Q4ZG55 1949 aa7.99□□□□□ -1.13
COL12A1-211ENST00000615798 PEX7O00628 323 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 CISD3P0C7P0 127 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 TNFRSF1AP19438 455 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 PPP1R27Q86WC6 154 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 GAPTQ8N292 157 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 C16orf52Q8NHV5 167 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 LRRC61Q9BV99 259 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 CHTOPQ9Y3Y2 248 aaKnown RBP7.98□□□□□ -1.13
COL12A1-211ENST00000615798 DLL1O00548 723 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 STARD6P59095 220 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 HIST3H2BBQ8N257 126 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 IGKV3D-11A0A0A0MRZ8 115 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 IGKV3-11P04433 115 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 BAALCQ8WXS3 180 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 HIST1H2BLQ99880 126 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 TMEM211Q6ICI0 200 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 BCL6BQ8N143 479 aaPredicted RBP7.98□□□□□ -1.13
COL12A1-211ENST00000615798 SLC25A40Q8TBP6 338 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 CACNG8Q8WXS5 425 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 EMC6Q9BV81 110 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 PRR13Q9NZ81 148 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 APOBEC3AP31941 199 aaPredicted RBP7.98□□□□□ -1.13
COL12A1-211ENST00000615798 SLC23A3Q6PIS1 610 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 LYZL2Q7Z4W2 148 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 SPTY2D1-AS1A0A0U1RR47 76 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 GZMBP10144 247 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 PTGDSP41222 190 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 GPR6P46095 362 aaPredicted RBP7.98□□□□□ -1.13
COL12A1-211ENST00000615798 TMEM178AQ8NBL3 297 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 MYEOVQ96EZ4 313 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 TMUB1Q9BVT8 246 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 CEACAM18A8MTB9 384 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 DEFB108AA8MXU0 73 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 C9JAW5 83 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 COX5BP10606 129 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 FBXW9Q5XUX1 488 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 NOXO1Q8NFA2 376 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 NPVFQ9HCQ7 196 aa7.98□□□□□ -1.13
COL12A1-211ENST00000615798 A0A1W2PS18 150 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 CTSVO60911 334 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 TPRX1Q8N7U7 411 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 HBDP02042 147 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 BGLAPP02818 100 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 IL11P20809 199 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 KLHDC2Q9Y2U9 406 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 C9orf118A6NHY6 69 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 PRB4P10163 310 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-211ENST00000615798 LIMS1P48059 325 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 VEGFBP49765 207 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 DCAF12Q5T6F0 453 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 CNOT1A5YKK6 2376 aaKnown RBP7.97□□□□□ -1.13
COL12A1-211ENST00000615798 M0R1B8 84 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 LEPROTO15243 131 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 WDR38Q5JTN6 314 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 FAM214BQ7L5A3 538 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 ZNRF1Q8ND25 227 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 SFXN3Q9BWM7 321 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 TDGF1P13385 188 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 PPYP01298 95 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 NGFRP08138 427 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 APCDD1LQ8NCL9 501 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 JPT2Q9H910 190 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 NBASA2RRP1 2371 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 TAF15Q92804 592 aaKnown RBP eCLIP7.97□□□□□ -1.13
COL12A1-211ENST00000615798 A0A0G2JMZ2 1700 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 LRRC37A2A6NM11 1700 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 FAM181AQ8N9Y4 354 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 ATOX1O00244 68 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 GVQW1Q8N7I0 195 aa7.97□□□□□ -1.13
COL12A1-211ENST00000615798 TRAV13-1A0A0B4J241 112 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 PLPP3O14495 311 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 MRPS11P82912 194 aaKnown RBP7.96□□□□□ -1.13
COL12A1-211ENST00000615798 WNT2BQ93097 391 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 PRADC1Q9BSG0 188 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 HCSTQ9UBK5 93 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 IQCF6A8MYZ5 107 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 LMO7DNF2Z398 122 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 FAM157BP0CG42 384 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 DEFB133Q30KQ1 61 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 RHNO1Q9BSD3 238 aa7.96□□□□□ -1.13
COL12A1-211ENST00000615798 KLF13Q9Y2Y9 288 aaPredicted RBP7.96□□□□□ -1.13
COL12A1-211ENST00000615798 TAX1BP3O14907 124 aa7.96□□□□□ -1.14
COL12A1-211ENST00000615798 ZNHIT1O43257 154 aa7.96□□□□□ -1.14
COL12A1-211ENST00000615798 TRA2AQ13595 282 aaKnown RBP eCLIP7.96□□□□□ -1.14
COL12A1-211ENST00000615798 PTPRFP10586 1907 aa7.96□□□□□ -1.14
COL12A1-211ENST00000615798 HIST1H2BKO60814 126 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms