RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SOX21Q9Y651 276 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-212ENST00000613856 WSB1Q9Y6I7 421 aa9.09□□□□□ -0.95
SLIRP-212ENST00000613856 A6NDX4 124 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 INS-IGF2F8WCM5 200 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 H3BUX3 64 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 FGF16O43320 207 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 NXPH3O95157 252 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 P2RY1P47900 373 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 EIF2B2P49770 351 aaKnown RBP9.08□□□□□ -0.96
SLIRP-212ENST00000613856 PRCDQ00LT1 54 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 HNF4GQ14541 408 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 HIST2H2BDQ6DRA6 164 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 Q8N9W7 124 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 OR1L8Q8NGR8 309 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 DCUN1D4Q92564 292 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 CIB3Q96Q77 187 aaPredicted RBP9.08□□□□□ -0.96
SLIRP-212ENST00000613856 COMMD5Q9GZQ3 224 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 MAGT1Q9H0U3 335 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
SLIRP-212ENST00000613856 TEX50A0A1B0GTY4 177 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 MDFIC2A0A1B0GVS7 189 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 CEBPZOSA8MTT3 80 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 L7N2F9 121 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 CHST1O43916 411 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 GPR137BO60478 399 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 TSC22D2O75157 780 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 IFNA17P01571 189 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 HLA-DRB1P01911 266 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 VDAC2P45880 294 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-212ENST00000613856 IER3P46695 156 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 VAMP2P63027 116 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 SSBP2P81877 361 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-212ENST00000613856 PJVKQ0ZLH3 352 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 SCGB2A2Q13296 93 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 ZNF345Q14585 488 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 PLGLAQ15195 96 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 TREML4Q6UXN2 200 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 Q6YL49 198 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 ZNF546Q86UE3 836 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 GRPEL2Q8TAA5 225 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 DTD1Q8TEA8 209 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 ZNF418Q8TF45 676 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-212ENST00000613856 C22orf15Q8WYQ4 148 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 SMIM8Q96KF7 97 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 ZNF48Q96MX3 618 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-212ENST00000613856 AQP10Q96PS8 301 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 SRSF8Q9BRL6 282 aaKnown RBP9.07□□□□□ -0.96
SLIRP-212ENST00000613856 SLC25A33Q9BSK2 321 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 NDUFA4L2Q9NRX3 87 aa9.07□□□□□ -0.96
SLIRP-212ENST00000613856 LYRM2Q9NU23 88 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-212ENST00000613856 A0A1W2PN81 502 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 RNF222A6NCQ9 220 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 CGB1A6NKQ9 187 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 NCBP2LA6PVI3 153 aaKnown RBP9.06□□□□□ -0.96
SLIRP-212ENST00000613856 TRIM77I1YAP6 450 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 M0QZK8 103 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 ARPC5O15511 151 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 ACTL6BO94805 426 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 TMEM50AO95807 157 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 CA2P00918 260 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 IAPPP10997 89 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 MYOD1P15172 320 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 CHRNA7P36544 502 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 RPL27AP46776 148 aaKnown RBP9.06□□□□□ -0.96
SLIRP-212ENST00000613856 HOXA1P49639 335 aaPredicted RBP9.06□□□□□ -0.96
SLIRP-212ENST00000613856 PAX9P55771 341 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 RPL23AP62750 156 aaKnown RBP9.06□□□□□ -0.96
SLIRP-212ENST00000613856 OR2F1Q13607 317 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 TNXAQ16473 311 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 ACOT7LQ6ZUV0 252 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 MRPL41Q8IXM3 137 aaKnown RBP9.06□□□□□ -0.96
SLIRP-212ENST00000613856 OR2C3Q8N628 320 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 C5orf56Q8N8D9 126 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 SSMEM1Q8WWF3 244 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 DUX5Q96PT3 197 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 CLCC1Q96S66 551 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 ZNF747Q9BV97 191 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 PLEKHA3Q9HB20 300 aa9.06□□□□□ -0.96
SLIRP-212ENST00000613856 A0A1B0GW64 132 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 BTBD17A6NE02 478 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 SCAF4O95104 1147 aaKnown RBP9.05□□□□□ -0.96
SLIRP-212ENST00000613856 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 HKR1P10072 659 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 NUP62P37198 522 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-212ENST00000613856 NKX2-5P52952 324 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-212ENST00000613856 C10orf55Q5SWW7 151 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 LAMTOR1Q6IAA8 161 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 ZNF562Q6V9R5 426 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 HSD17B13Q7Z5P4 300 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-212ENST00000613856 TMEM219Q86XT9 240 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 TMEM86BQ8N661 226 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 INO80EQ8NBZ0 244 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-212ENST00000613856 SRSF12Q8WXF0 261 aaKnown RBP9.05□□□□□ -0.96
SLIRP-212ENST00000613856 RASL11BQ9BPW5 248 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 MFFQ9GZY8 342 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 HIPK2Q9H2X6 1198 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 ENY2Q9NPA8 101 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 PSENENQ9NZ42 101 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms