RNA–Protein interactions for RNA: ENST00000612569.1

ABCA7-219, Transcript of ATP binding cassette subfamily A member 7, human

TSL 3

Gene ABCA7, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-219	ENST00000612569	BORCS5	Q969J3	196 aa		12.81	□□□□□ -0.36
ABCA7-219	ENST00000612569	DGCR14	Q96DF8	476 aa	Known RBP	12.81	□□□□□ -0.36
ABCA7-219	ENST00000612569	WDR89	Q96FK6	387 aa	Predicted RBP	12.81	□□□□□ -0.36
ABCA7-219	ENST00000612569	NEURL2	Q9BR09	285 aa		12.81	□□□□□ -0.36
ABCA7-219	ENST00000612569	NAA50	Q9GZZ1	169 aa	Known RBP	12.81	□□□□□ -0.36
ABCA7-219	ENST00000612569	WFDC10A	Q9H1F0	79 aa		12.81	□□□□□ -0.36
ABCA7-219	ENST00000612569	TRBV7-1	A0A0A6YYK4	115 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	IGHV3-35	A0A0C4DH35	117 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	TMEM213	A2RRL7	107 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	GPR31	O00270	319 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	KRAS	P01116	189 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	APOA1	P02647	267 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	TRAPPC2	P0DI81	140 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	TRAPPC2B	P0DI82	140 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	CBLN1	P23435	193 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	GPR183	P32249	361 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	G6PC	P35575	357 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	ERVK-16	P61578	105 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	WT1-AS	Q06250	92 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	GUCA2B	Q16661	112 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	UNQ9165/PRO28630	Q6UXU0	137 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	CMTM1	Q8IZ96	169 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	DEFB125	Q8N687	156 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	ZNF502	Q8TBZ5	544 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	CXorf58	Q96LI9	332 aa		12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	SRSF8	Q9BRL6	282 aa	Known RBP	12.8	□□□□□ -0.36
ABCA7-219	ENST00000612569	SMIM31	A0A1B0GVY4	71 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	FGF2	P09038	288 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	OR13C7	P0DN81	318 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	FAM106A	Q4KMX7	169 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	TM4SF20	Q53R12	229 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	SPATA25	Q9BR10	227 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	HINT2	Q9BX68	163 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	RETN	Q9HD89	108 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	TECR	Q9NZ01	308 aa	Known RBP	12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	MLX	Q9UH92	298 aa		12.79	□□□□□ -0.36
ABCA7-219	ENST00000612569	IGHV3-21	A0A0B4J1V1	117 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	DBX1	A6NMT0	343 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	TPPP	O94811	219 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	SMIM18	P0DKX4	95 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	PTBP1	P26599	531 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	7e-8	■■■□□ 17.8
ABCA7-219	ENST00000612569	MFAP2	P55001	183 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	TSPAN5	P62079	268 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	RNASE12	Q5GAN4	147 aa	Known RBP	12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	LINC00322	Q6ZN03	302 aa	Predicted RBP	12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	LAX1	Q8IWV1	398 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	GDPD1	Q8N9F7	314 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	UXS1	Q8NBZ7	420 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	OR1L8	Q8NGR8	309 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	CMTM3	Q96MX0	182 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	SCPEP1	Q9HB40	452 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	NDUFA4L2	Q9NRX3	87 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	SLC2A8	Q9NY64	477 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	OR51B2	Q9Y5P1	312 aa		12.78	□□□□□ -0.36
ABCA7-219	ENST00000612569	RBMY1B	A6NDE4	496 aa	Known RBP	12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	RBMY1E	A6NEQ0	496 aa	Known RBP	12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569		A8MWP6	167 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569		M0QYG6	137 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	SERPINE2	P07093	398 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	RBMY1D	P0C7P1	496 aa	Known RBP	12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	RCVRN	P35243	200 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	RORC	P51449	518 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	SLC25A24	Q6NUK1	477 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	TBC1D26	Q86UD7	250 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	TMEM61	Q8N0U2	210 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	CEPT1	Q9Y6K0	416 aa		12.77	□□□□□ -0.37
ABCA7-219	ENST00000612569	OR11H12	B2RN74	326 aa		12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	SNAPC5	O75971	98 aa		12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	CTF1	Q16619	201 aa		12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	ZNF57	Q68EA5	555 aa	Predicted RBP	12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	THOC7	Q6I9Y2	204 aa	Known RBP	12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	PLET1	Q6UQ28	207 aa		12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	BTNL8	Q6UX41	500 aa		12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	LSM10	Q969L4	123 aa	Known RBP	12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	SRD5A3	Q9H8P0	318 aa		12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	THYN1	Q9P016	225 aa		12.76	□□□□□ -0.37
ABCA7-219	ENST00000612569	OR2T8	A6NH00	312 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	FAM25A	B3EWG3	89 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	FAM25C	B3EWG5	89 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	FAM25G	B3EWG6	89 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	SCAF4	O95104	1147 aa	Known RBP	12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	IGKV1-39	P01597	117 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	IGKV1D-39	P04432	117 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	VN1R17P	Q8TDU5	208 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	FAM110A	Q9BQ89	295 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	HIPK2	Q9H2X6	1198 aa		12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	F11R	Q9Y624	299 aa	Known RBP	12.75	□□□□□ -0.37
ABCA7-219	ENST00000612569	TGOLN2	O43493	480 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	GABARAP	O95166	117 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	GPR107	Q5VW38	600 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	LPCAT3	Q6P1A2	487 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	SLC38A6	Q8IZM9	456 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	CADM3	Q8N126	398 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	ZNF436	Q9C0F3	470 aa	Predicted RBP	12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	TMEM14B	Q9NUH8	114 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	KLK11	Q9UBX7	282 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	PRND	Q9UKY0	176 aa		12.74	□□□□□ -0.37
ABCA7-219	ENST00000612569	C15orf61	A6NNL5	157 aa		12.73	□□□□□ -0.37
ABCA7-219	ENST00000612569		F8W735	103 aa	Predicted RBP	12.73	□□□□□ -0.37

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