RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 VSTM5A8MXK1 200 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 GGCTO75223 188 aaKnown RBP12.07□□□□□ -0.48
CDH1-213ENST00000612417 CD99P14209 185 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 SRP14P37108 136 aaKnown RBP12.07□□□□□ -0.48
CDH1-213ENST00000612417 EDDM3BP56851 147 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 FAM3BP58499 235 aaPredicted RBP12.07□□□□□ -0.48
CDH1-213ENST00000612417 C4orf17Q53FE4 359 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 COA6Q5JTJ3 125 aaKnown RBP12.07□□□□□ -0.48
CDH1-213ENST00000612417 VKORC1L1Q8N0U8 176 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 TMEM170AQ8WVE7 144 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 MGST2Q99735 147 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 GFOD1Q9NXC2 390 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 TCF19Q9Y242 345 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 PKDREJQ9NTG1 2253 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 TRAV38-1A0A0B4J264 116 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 A0A1W2PPV4 95 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 PPP5D1E7EU14 171 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 F6UZH7 168 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 TYMSP04818 313 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 TMEM11P17152 192 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 GRNP28799 593 aaKnown RBP12.06□□□□□ -0.48
CDH1-213ENST00000612417 TNFAIP6P98066 277 aaPredicted RBP12.06□□□□□ -0.48
CDH1-213ENST00000612417 ADIPOQQ15848 244 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 GCSAMLQ5JQS6 135 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 TMEM183AQ8IXX5 376 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 SDSLQ96GA7 329 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 FAM234AQ9H0X4 552 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
CDH1-213ENST00000612417 LSM4Q9Y4Z0 139 aaKnown RBP12.06□□□□□ -0.48
CDH1-213ENST00000612417 RAI1Q7Z5J4 1906 aaPredicted RBP12.06□□□□□ -0.48
CDH1-213ENST00000612417 TRAV3A0A0B4J244 114 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 KBTBD11-OT1A0A1B0GTJ5 212 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 IGHV1-46P01743 117 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 STAG3L2P0CL84 134 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 STAG3L3P0CL85 134 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
CDH1-213ENST00000612417 FBXL19-AS1Q494R0 122 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 C1orf229Q6ZS94 237 aaPredicted RBP12.06□□□□□ -0.48
CDH1-213ENST00000612417 TMEM14BQ9NUH8 114 aa12.06□□□□□ -0.48
CDH1-213ENST00000612417 HIVEP3Q5T1R4 2406 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 THBS3P49746 956 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 GNB1P62873 340 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 POU2AF1Q16633 256 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 PDZD11Q5EBL8 140 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 CT45A1Q5HYN5 189 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 NECAP1Q8NC96 275 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 CT45A3Q8NHU0 189 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 ADTRPQ96IZ2 230 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 HIST1H2BLQ99880 126 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 ELOVL1Q9BW60 279 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 LINC00574Q9H8X3 128 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
CDH1-213ENST00000612417 PXMP4Q9Y6I8 212 aa12.05□□□□□ -0.48
CDH1-213ENST00000612417 DYSFO75923 2080 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 SPTBN1Q01082 2364 aaKnown RBP12.04□□□□□ -0.48
CDH1-213ENST00000612417 SAA2-SAA4A0A096LPE2 208 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 CD3EP07766 207 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 SAA2P0DJI9 122 aaPredicted RBP12.04□□□□□ -0.48
CDH1-213ENST00000612417 FABP4P15090 132 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 CDSNQ15517 529 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 STUMQ69YW2 141 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 OR2T10Q8NGZ9 312 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 RHOVQ96L33 236 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 NPVFQ9HCQ7 196 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 CXorf1O96002 111 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 IGHV3-7P01780 117 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 ATP5G3P48201 142 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 LCN2P80188 198 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 TMEM30BQ3MIR4 351 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 OR4A47Q6IF82 309 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 CDPF1Q6NVV7 123 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 ABHD12Q8N2K0 398 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 ZNF383Q8NA42 475 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 ZNF439Q8NDP4 499 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 NEUROG1Q92886 237 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 C1orf159Q96HA4 380 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 ACY3Q96HD9 319 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 IMMP2LQ96T52 175 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 PCGF1Q9BSM1 259 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 PRDM13Q9H4Q3 707 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
CDH1-213ENST00000612417 RNF7Q9UBF6 113 aa12.04□□□□□ -0.48
CDH1-213ENST00000612417 ANKHD1Q8IWZ3 2542 aaKnown RBP12.04□□□□□ -0.48
CDH1-213ENST00000612417 SMG1Q96Q15 3661 aaKnown RBP12.03□□□□□ -0.48
CDH1-213ENST00000612417 TRGV10A0A0A0MS01 117 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.03□□□□□ -0.48
CDH1-213ENST00000612417 A0A1W2PPQ1 181 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 SHISA9B4DS77 424 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 FNDC10F2Z333 226 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 ARL14EPLP0DKL9 152 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 PDLIM4P50479 330 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 HSPE1P61604 102 aaKnown RBP12.03□□□□□ -0.48
CDH1-213ENST00000612417 ACTL10Q5JWF8 245 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 UTF1Q5T230 341 aa12.03□□□□□ -0.48
CDH1-213ENST00000612417 KCNIP4Q6PIL6 250 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms