RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ZNF585BQ52M93 769 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 AADACL3Q5VUY0 350 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 PLET1Q6UQ28 207 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 RBPMS2Q6ZRY4 209 aaKnown RBP13.28□□□□□ -0.28
SSBP1-215ENST00000612337 TMEM17Q86X19 198 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 DMBX1Q8NFW5 382 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 VN1R17PQ8TDU5 208 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 YIPF6Q96EC8 236 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 VCX3AQ9NNX9 186 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 COMMD9Q9P000 198 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 UFC1Q9Y3C8 167 aa13.28□□□□□ -0.28
SSBP1-215ENST00000612337 CYB5BO43169 146 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 TGOLN2O43493 480 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 GNRHRP30968 328 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 HERV-K104P61576 105 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 GDPD1Q8N9F7 314 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 OR1L6Q8NGR2 347 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 BORCS5Q969J3 196 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 OVOL2Q9BRP0 275 aa13.27□□□□□ -0.29
SSBP1-215ENST00000612337 ZNF436Q9C0F3 470 aaPredicted RBP13.27□□□□□ -0.29
SSBP1-215ENST00000612337 IGHV3-35A0A0C4DH35 117 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 MEIS3P1A6NDR6 274 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 XRCC3O43542 346 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 TRAPPC2P0DI81 140 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 TRAPPC2BP0DI82 140 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 TGFBR1P36897 503 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-215ENST00000612337 CROCCP3Q8IVE0 287 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 TMEM190Q8WZ59 177 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 C5orf66Q9H5L9 145 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 IFT46Q9NQC8 304 aa13.26□□□□□ -0.29
SSBP1-215ENST00000612337 TEX50A0A1B0GTY4 177 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 MARCH11A6NNE9 402 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 SERPINE2P07093 398 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 OR13C7P0DN81 318 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 RPA2P15927 270 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 RPS19P39019 145 aaKnown RBP13.25□□□□□ -0.29
SSBP1-215ENST00000612337 ERVK-16P61578 105 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 WT1-ASQ06250 92 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 DHRS11Q6UWP2 260 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 OR2C3Q8N628 320 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 OR1L8Q8NGR8 309 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 EHFQ9NZC4 300 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 KMT2AQ03164 3969 aa13.25□□□□□ -0.29
SSBP1-215ENST00000612337 OR2T8A6NH00 312 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 F2RP25116 425 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 SLC25A24Q6NUK1 477 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 SLC38A6Q8IZM9 456 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 CADM3Q8N126 398 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 MOB3AQ96BX8 217 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 S100A16Q96FQ6 103 aaKnown RBP13.24□□□□□ -0.29
SSBP1-215ENST00000612337 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-215ENST00000612337 ATP6V0BQ99437 205 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 SPAG8Q99932 426 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-215ENST00000612337 NDUFA4L2Q9NRX3 87 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 ANAPC10Q9UM13 185 aa13.24□□□□□ -0.29
SSBP1-215ENST00000612337 FRAS1Q86XX4 4008 aa13.23□□□□□ -0.29
SSBP1-215ENST00000612337 TSPAN4O14817 238 aa13.23□□□□□ -0.29
SSBP1-215ENST00000612337 PGLYRP1O75594 196 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-215ENST00000612337 RLN1P04808 185 aa13.23□□□□□ -0.29
SSBP1-215ENST00000612337 RFX2P48378 723 aa13.23□□□□□ -0.29
SSBP1-215ENST00000612337 LSM3P62310 102 aaKnown RBP13.23□□□□□ -0.29
SSBP1-215ENST00000612337 UBE2NLQ5JXB2 153 aa13.23□□□□□ -0.29
SSBP1-215ENST00000612337 SPSB3Q6PJ21 355 aa13.23□□□□□ -0.29
SSBP1-215ENST00000612337 LSM10Q969L4 123 aaKnown RBP13.23□□□□□ -0.29
SSBP1-215ENST00000612337 ZNF2Q9BSG1 426 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-215ENST00000612337 DAZ1Q9NQZ3 744 aaKnown RBP13.23□□□□□ -0.29
SSBP1-215ENST00000612337 F11RQ9Y624 299 aaKnown RBP13.23□□□□□ -0.29
SSBP1-215ENST00000612337 MFAP2P55001 183 aa13.22□□□□□ -0.29
SSBP1-215ENST00000612337 LAMTOR1Q6IAA8 161 aa13.22□□□□□ -0.29
SSBP1-215ENST00000612337 WFDC3Q8IUB2 231 aa13.22□□□□□ -0.29
SSBP1-215ENST00000612337 FCAMRQ8WWV6 532 aa13.22□□□□□ -0.29
SSBP1-215ENST00000612337 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
SSBP1-215ENST00000612337 C21orf62Q9NYP8 219 aa13.22□□□□□ -0.29
SSBP1-215ENST00000612337 TP53TG1Q9Y2A0 90 aa13.22□□□□□ -0.29
SSBP1-215ENST00000612337 NDUFA4O00483 81 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 KRASP01116 189 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 PMP2P02689 132 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 NAT1P18440 290 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 LPAR6P43657 344 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 APOC4P55056 127 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 TAS2R46P59540 309 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 TMEM69Q5SWH9 247 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 Q6ZWC4 215 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 CMTM1Q8IZ96 169 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 OR5H2Q8NGV7 314 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 SCARB1Q8WTV0 552 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 CHRDL1Q9BU40 450 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 HINT2Q9BX68 163 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 FXYD6Q9H0Q3 95 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 NSG2Q9Y328 171 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 OR51B2Q9Y5P1 312 aa13.21□□□□□ -0.29
SSBP1-215ENST00000612337 IGHV3-21A0A0B4J1V1 117 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
SSBP1-215ENST00000612337 UBE2CO00762 179 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 SNAPC5O75971 98 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 G6PCP35575 357 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 TAS2R20P59543 309 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 SAMD12Q8N8I0 201 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms