RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	FOXA2	Q9Y261	457 aa	Predicted RBP	11.33	□□□□□ -0.6
UBE2F-223	ENST00000612130	DIDO1	Q9BTC0	2240 aa	Known RBP	11.33	□□□□□ -0.6
UBE2F-223	ENST00000612130	TRAV3	A0A0B4J244	114 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	CRYBB3	P26998	211 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	PMCHL1	Q16048	86 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	C21orf62-AS1	Q17RA5	79 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	MORN2	Q502X0	79 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	RASL11A	Q6T310	242 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	VKORC1L1	Q8N0U8	176 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	ZPBP	Q9BS86	351 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	RNASE7	Q9H1E1	156 aa	Known RBP	11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	CDC42EP3	Q9UKI2	254 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	MRPS16	Q9Y3D3	137 aa	Known RBP	11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	CA2	P00918	260 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	TFF1	P04155	84 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	LINC00869	P0C866	280 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	KIAA1644	Q3SXP7	199 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	OR5B3	Q8NH48	314 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	TSKU	Q8WUA8	353 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	BORCS7	Q96B45	105 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	COMMD5	Q9GZQ3	224 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	ENY2	Q9NPA8	101 aa		11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	TECR	Q9NZ01	308 aa	Known RBP	11.32	□□□□□ -0.6
UBE2F-223	ENST00000612130	CER1	O95813	267 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	APCS	P02743	223 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	IGFBP2	P18065	325 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	LTC4S	Q16873	150 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	IBA57	Q5T440	356 aa	Known RBP	11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	INO80C	Q6PI98	192 aa	Predicted RBP	11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	WIPF2	Q8TF74	440 aa	Predicted RBP	11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	DDB2	Q92466	427 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	IGF2BP2-AS1	Q96M15	143 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	C19orf24	Q9BVV8	132 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	IFI27L2	Q9H2X8	130 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	SLC35D1	Q9NTN3	355 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	TMEM14B	Q9NUH8	114 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	WDR87	Q6ZQQ6	2873 aa		11.31	□□□□□ -0.6
UBE2F-223	ENST00000612130	IZUMO1R	A6ND01	250 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	SPINK4	O60575	86 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	TOMM40	O96008	361 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	IGLV2-8	P01709	118 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	MEOX1	P50221	254 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	PPOX	P50336	477 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	KLF3	P57682	345 aa	Predicted RBP	11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	SELENOV	P59797	346 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	HSPE1	P61604	102 aa	Known RBP	11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	HOXA4	Q00056	320 aa	Predicted RBP	11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	FXYD3	Q14802	87 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	CR1L	Q2VPA4	569 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	RPL39P5	Q59GN2	51 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	STUM	Q69YW2	141 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	PNKD	Q8N490	385 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	ZNF439	Q8NDP4	499 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	DCTN5	Q9BTE1	182 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	FAM234A	Q9H0X4	552 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	SIT1	Q9Y3P8	196 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	DOCK10	Q96BY6	2186 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130		A0A1W2PRE2	83 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	TSPO	P30536	169 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	TCL1A	P56279	114 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	TAS2R45	P59539	299 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	EDDM3A	Q14507	147 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	MRPL54	Q6P161	138 aa	Known RBP	11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	CD177	Q8N6Q3	437 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	NABP2	Q9BQ15	211 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	GAL3ST2	Q9H3Q3	398 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	CFAP54	Q96N23	3096 aa		11.3	□□□□□ -0.6
UBE2F-223	ENST00000612130	GGTLC3	B5MD39	225 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	F2RL2	O00254	374 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	ITGB1BP1	O14713	200 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	ACTL6B	O94805	426 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	IGHV1-2	P23083	117 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	LEMD1	Q68G75	181 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	C18orf32	Q8TCD1	76 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	ZNF503	Q96F45	646 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	TUBG2	Q9NRH3	451 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	IGHV2-26	A0A0B4J1V2	119 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	TIMM8A	O60220	97 aa	Predicted RBP	11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	PRDX2	P32119	198 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	PTTG1IP	P53801	180 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	LOXL3	P58215	753 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	SLC35B1	P78383	322 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	ANKRD39	Q53RE8	183 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	PLEKHA3	Q9HB20	300 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	BET1L	Q9NYM9	111 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	PPIAL4A	Q9Y536	164 aa		11.29	□□□□□ -0.6
UBE2F-223	ENST00000612130	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	KLRC4-KLRK1	H3BQV0	150 aa		11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	MGST3	O14880	152 aa		11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	USF1	P22415	310 aa	Predicted RBP	11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	OR4A47	Q6IF82	309 aa		11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	LINC00696	Q6ZRV3	163 aa		11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	PPP1R35	Q8TAP8	253 aa		11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	WNT10A	Q9GZT5	417 aa		11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	COX11	Q9Y6N1	276 aa		11.28	□□□□□ -0.6
UBE2F-223	ENST00000612130	TNRC18	O15417	2968 aa	Predicted RBP	11.28	□□□□□ -0.6

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