RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ZNF407Q9C0G0 2248 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 ZNF318Q5VUA4 2279 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 IGKV1-5P01602 117 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 REG1AP05451 166 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 PRSS1P07477 247 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 CA7P43166 264 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 LGALS7P47929 136 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 IFI27L2Q9H2X8 130 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 TMEM242Q9NWH2 141 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 WDR83OSQ9Y284 106 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 KBTBD11-OT1A0A1B0GTJ5 212 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 C1QTNF9P0C862 333 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 ERVFRD-1P60508 538 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 FAM216BQ8N7L0 139 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 C9orf106Q8NAJ2 232 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 OR8A1Q8NGG7 326 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 OSR1Q8TAX0 266 aaPredicted RBP10.41□□□□□ -0.74
CDH1-212ENST00000611625 SPTBN1Q01082 2364 aaKnown RBP10.41□□□□□ -0.74
CDH1-212ENST00000611625 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 Q6ZS49 121 aa10.41□□□□□ -0.74
CDH1-212ENST00000611625 SS18L1O75177 396 aaPredicted RBP10.4□□□□□ -0.74
CDH1-212ENST00000611625 CSRP1P21291 193 aaKnown RBP10.4□□□□□ -0.74
CDH1-212ENST00000611625 Q0VFX4 171 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 COTL1Q14019 142 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 WIPF3A6NGB9 483 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 YPEL1O60688 119 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 MAS1LP35410 378 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 BPIFA4PQ86YQ2 179 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 HIST3H2BBQ8N257 126 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
CDH1-212ENST00000611625 YPEL2Q96QA6 119 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 UFC1Q9Y3C8 167 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 FER1L5A0AVI2 2057 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 LRRK1Q38SD2 2015 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 TICRRQ7Z2Z1 1910 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 IFITM10A6NMD0 228 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 H3BTX0 84 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 NDUFA2O43678 99 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 TCF21O43680 179 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 GFI1BQ5VTD9 330 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 RPP25LQ8N5L8 163 aaKnown RBP10.4□□□□□ -0.74
CDH1-212ENST00000611625 PGLYRP4Q96LB8 373 aa10.4□□□□□ -0.74
CDH1-212ENST00000611625 GTF2H5Q6ZYL4 71 aa10.4□□□□□ -0.75
CDH1-212ENST00000611625 BMPERQ8N8U9 685 aa10.4□□□□□ -0.75
CDH1-212ENST00000611625 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.75
CDH1-212ENST00000611625 CDC42EP3Q9UKI2 254 aa10.4□□□□□ -0.75
CDH1-212ENST00000611625 CDX4O14627 284 aaPredicted RBP10.39□□□□□ -0.75
CDH1-212ENST00000611625 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 HINT1P49773 126 aaPredicted RBP10.39□□□□□ -0.75
CDH1-212ENST00000611625 MORN2Q502X0 79 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 ACACAQ13085 2346 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 TRBV6-6A0A0A6YYG2 114 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDH1-212ENST00000611625 MOSP00540 346 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 DUTP33316 252 aaKnown RBP10.39□□□□□ -0.75
CDH1-212ENST00000611625 PPOXP50336 477 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 ACSF3Q4G176 576 aaPredicted RBP10.39□□□□□ -0.75
CDH1-212ENST00000611625 GCSAMLQ5JQS6 135 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 SPRR3Q9UBC9 169 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 POLEQ07864 2286 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 PSPNO60542 156 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 TMEM97Q5BJF2 176 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 ZCCHC14Q8WYQ9 949 aaKnown RBP10.39□□□□□ -0.75
CDH1-212ENST00000611625 TRAV9-1A0A075B6T8 112 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 A0A0G2JRQ6 117 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 PGPEP1LA6NFU8 196 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 SOD3P08294 240 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 OR9G9P0C7N8 305 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 GATA2P23769 480 aaPredicted RBP10.39□□□□□ -0.75
CDH1-212ENST00000611625 GPX4P36969 197 aaPredicted RBP10.39□□□□□ -0.75
CDH1-212ENST00000611625 HERPUD1Q15011 391 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 CCDC144NLQ6NUI1 221 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 TMEM105Q8N8V8 129 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 HILPDAQ9Y5L2 63 aa10.39□□□□□ -0.75
CDH1-212ENST00000611625 TM4SF5O14894 197 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 LILRA1O75019 489 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 TMEM14EPQ6UXP3 125 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 TMEM144Q7Z5S9 345 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 AKAP6Q13023 2319 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 RELBQ01201 579 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 C15orf61A6NNL5 157 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 GOSR1O95249 250 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 IL18BPO95998 194 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 COMPP49747 757 aaPredicted RBP10.38□□□□□ -0.75
CDH1-212ENST00000611625 RPL30P62888 115 aaKnown RBP10.38□□□□□ -0.75
CDH1-212ENST00000611625 FAM27E3Q08E93 113 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 JOSD1Q15040 202 aaPredicted RBP10.38□□□□□ -0.75
CDH1-212ENST00000611625 TCF23Q7RTU1 214 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 ZNF738Q8NE65 137 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 OR5R1Q8NH85 324 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 GRAMD2BQ96HH9 432 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 SAA2-SAA4A0A096LPE2 208 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 OR2T8A6NH00 312 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 SAA2P0DJI9 122 aaPredicted RBP10.38□□□□□ -0.75
CDH1-212ENST00000611625 HOXA4Q00056 320 aaPredicted RBP10.38□□□□□ -0.75
CDH1-212ENST00000611625 SPSB3Q6PJ21 355 aa10.38□□□□□ -0.75
CDH1-212ENST00000611625 LINC00305Q7Z4B0 112 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms