RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 MAS1LP35410 378 aa11.96□□□□□ -0.49
PCDHB16-201ENST00000609684 RPL13AP40429 203 aaKnown RBP11.96□□□□□ -0.49
PCDHB16-201ENST00000609684 CCL3L1P16619 93 aa11.96□□□□□ -0.49
PCDHB16-201ENST00000609684 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.49
PCDHB16-201ENST00000609684 WFIKKN1Q96NZ8 548 aa11.96□□□□□ -0.49
PCDHB16-201ENST00000609684 CDC42EP3Q9UKI2 254 aa11.96□□□□□ -0.49
PCDHB16-201ENST00000609684 LINC00312Q9Y6C7 94 aa11.96□□□□□ -0.49
PCDHB16-201ENST00000609684 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.5
PCDHB16-201ENST00000609684 VENTXO95231 258 aa11.96□□□□□ -0.5
PCDHB16-201ENST00000609684 DPM3Q9P2X0 92 aa11.96□□□□□ -0.5
PCDHB16-201ENST00000609684 GCGP01275 180 aa11.96□□□□□ -0.5
PCDHB16-201ENST00000609684 ZNF385CQ66K41 422 aaPredicted RBP11.96□□□□□ -0.5
PCDHB16-201ENST00000609684 C5orf63A6NC05 138 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 LDLRAD4O15165 306 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 SEMA5BQ9P283 1151 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 PSG9Q00887 426 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 Q0VFX4 171 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 ZCCHC24Q8N2G6 241 aaKnown RBP11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 CBY1Q9Y3M2 126 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 IGKV1-27A0A075B6S5 117 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 CA7P43166 264 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 EBLN2Q6P2I7 272 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 NEU1Q99519 415 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 SAA2-SAA4A0A096LPE2 208 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 RAMP3O60896 148 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 SAA2P0DJI9 122 aaPredicted RBP11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 PDLIM4P50479 330 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 CLDND2Q8NHS1 167 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 S4R3C0 116 aa11.95□□□□□ -0.5
PCDHB16-201ENST00000609684 PI4KAP42356 2102 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 IGHV1-18A0A0C4DH31 117 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 FOXH1O75593 365 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 CSRP1P21291 193 aaKnown RBP11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 CBLN1P23435 193 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 ATP5G3P48201 142 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 IGHV3OR16-13A0A075B7E8 117 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 IGHV3-74A0A0B4J1X5 117 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 FOXF2Q12947 444 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 PNRC2Q9NPJ4 139 aaKnown RBP11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 F8VVB4 439 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 F8VWA3 439 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 YPEL1O60688 119 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 LEPROTL1O95214 131 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 GATA2P23769 480 aaPredicted RBP11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 NMUP48645 174 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 LINC00518Q8N0U6 118 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 YPEL2Q96QA6 119 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 ZFP30Q9Y2G7 519 aa11.94□□□□□ -0.5
PCDHB16-201ENST00000609684 DOCK8Q8NF50 2099 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 ZNF25P17030 456 aaPredicted RBP11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 BTF3P20290 206 aaKnown RBP11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 ZNF324BQ6AW86 544 aaPredicted RBP11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 FAM166AQ6J272 317 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 LHFPL1Q86WI0 220 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 GBF1Q92538 1859 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 SCO2A0A1W2PP80 73 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 NBEAP1P0C6P0 100 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 ID3Q02535 119 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 MORN2Q502X0 79 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 RNF144BQ7Z419 303 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 IGKV1D-33P01593 117 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 IGKV1-33P01594 117 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 SAA1P0DJI8 122 aaPredicted RBP11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 ANOS1P23352 680 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 LCN2P80188 198 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 ELOVL1Q9BW60 279 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
PCDHB16-201ENST00000609684 SNCGO76070 127 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 CX3CL1P78423 397 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 ICAM4Q14773 271 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 CD55P08174 381 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 NPPCP23582 126 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 SLC17A3O00476 420 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 GPX4P36969 197 aaPredicted RBP11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 RELQ04864 619 aaPredicted RBP11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 LBHQ53QV2 105 aaPredicted RBP11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 DCAF16Q9NXF7 216 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 A6NDN8 102 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 OR4C46A6NHA9 309 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 SUPT4H1P63272 117 aaKnown RBP11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 PRB3Q04118 309 aaPredicted RBP11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 SPATA45Q537H7 98 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 MIR17HGQ75NE6 70 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 BMPERQ8N8U9 685 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 EEF1AKMT3Q96AZ1 226 aa11.92□□□□□ -0.5
PCDHB16-201ENST00000609684 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 RNFT1Q5M7Z0 435 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 OR4B1Q8NGF8 309 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 SPTAN1Q13813 2472 aaKnown RBP11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 RAB9AP51151 201 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 FHL1Q13642 323 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 LYRM7Q5U5X0 104 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 CCL19Q99731 98 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms