RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CD177Q8N6Q3 437 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 IFI27L2Q9H2X8 130 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 MRPL27Q9P0M9 148 aaKnown RBP18.43■□□□□ 0.54
SHANK2-220ENST00000608988 DOCK11Q5JSL3 2073 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 A0A1W2PS18 150 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 ZNF324O75467 553 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-220ENST00000608988 TAS2R45P59539 299 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 OR5I1Q13606 314 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 POU2AF1Q16633 256 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 TPRX1Q8N7U7 411 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 C1orf162Q8NEQ5 155 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-220ENST00000608988 ADTRPQ96IZ2 230 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 COMMD5Q9GZQ3 224 aa18.42■□□□□ 0.54
SHANK2-220ENST00000608988 IGKV3-15P01624 115 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 UBALD2Q8IYN6 164 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 MAFAQ8NHW3 353 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-220ENST00000608988 STARD4Q96DR4 205 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 TRAV3A0A0B4J244 114 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 A0A1W2PRE2 83 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 LOXL3P58215 753 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 PSG5Q15238 335 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 CYB5R2Q6BCY4 276 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 Q6ZT83 130 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 WIPF2Q8TF74 440 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-220ENST00000608988 LRRC29Q8WV35 223 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 SPRR3Q9UBC9 169 aa18.41■□□□□ 0.54
SHANK2-220ENST00000608988 C20orf202A1L168 122 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 IZUMO1RA6ND01 250 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 C9orf172C9J069 976 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 CA2P00918 260 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 IGLC2P0DOY2 106 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 IGLC3P0DOY3 106 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 CHRNB4P30926 498 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 BATFQ16520 125 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 MBNL2Q5VZF2 373 aaKnown RBP18.4■□□□□ 0.54
SHANK2-220ENST00000608988 MIR17HGQ75NE6 70 aa18.4■□□□□ 0.54
SHANK2-220ENST00000608988 FAM103A1Q9BTL3 118 aaKnown RBP18.4■□□□□ 0.54
SHANK2-220ENST00000608988 YLPM1P49750 1951 aaKnown RBP18.4■□□□□ 0.54
SHANK2-220ENST00000608988 IGFBP2P18065 325 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 CRYBB3P26998 211 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 HOXC12P31275 282 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 PPOXP50336 477 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 EDDM3AQ14507 147 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 RPL39P5Q59GN2 51 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 ORAOV1Q8WV07 137 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 GUCD1Q96NT3 240 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 NABP2Q9BQ15 211 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 DCTN5Q9BTE1 182 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 PRNDQ9UKY0 176 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 ZNF257Q9Y2Q1 563 aa18.39■□□□□ 0.54
SHANK2-220ENST00000608988 CFHR2P36980 270 aa18.39■□□□□ 0.53
SHANK2-220ENST00000608988 PMCHL1Q16048 86 aa18.39■□□□□ 0.53
SHANK2-220ENST00000608988 VKORC1L1Q8N0U8 176 aa18.39■□□□□ 0.53
SHANK2-220ENST00000608988 DEFB127Q9H1M4 99 aa18.39■□□□□ 0.53
SHANK2-220ENST00000608988 BMPR1BO00238 502 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 TFF1P04155 84 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 ZNF83P51522 516 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 LTC4SQ16873 150 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 OR4A47Q6IF82 309 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 TMPRSS7Q7RTY8 843 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 GCSAMQ8N6F7 178 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 OR5B3Q8NH48 314 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 RNF114Q9Y508 228 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 TRIOO75962 3097 aa18.38■□□□□ 0.53
SHANK2-220ENST00000608988 DPRXA6NFQ7 191 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 SRRM5B3KS81 715 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 LYZL6O75951 148 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 APCSP02743 223 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 HNRNPA3P51991 378 aaKnown RBP18.37■□□□□ 0.53
SHANK2-220ENST00000608988 C11orf42Q8N5U0 333 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 IGF2BP2-AS1Q96M15 143 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 FER1L6-AS2Q96M78 137 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 MRPL32Q9BYC8 188 aaKnown RBP18.37■□□□□ 0.53
SHANK2-220ENST00000608988 MRPS16Q9Y3D3 137 aaKnown RBP18.37■□□□□ 0.53
SHANK2-220ENST00000608988 HYPMO75409 117 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 FRMD6-AS1P0C7T7 363 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 SRIP30626 198 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 IBA57Q5T440 356 aaKnown RBP18.37■□□□□ 0.53
SHANK2-220ENST00000608988 BORCS7Q96B45 105 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 FAM234AQ9H0X4 552 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 SLC35D1Q9NTN3 355 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 IDI2-AS1Q9NZ38 188 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 CLCF1Q9UBD9 225 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 CDC42EP3Q9UKI2 254 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 COL6A3P12111 3177 aa18.37■□□□□ 0.53
SHANK2-220ENST00000608988 SIAH2O43255 324 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 IGLV2-8P01709 118 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 C3orf79P0CE67 100 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 SELENOVP59797 346 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 FAM231DQ6ZW35 169 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 NIT1Q86X76 327 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 DOLPP1Q86YN1 238 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 ZNF439Q8NDP4 499 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 TXN2Q99757 166 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 PLEKHA3Q9HB20 300 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 ZNF331Q9NQX6 463 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-220ENST00000608988 CALYQ9NYX4 217 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 LAMTOR2Q9Y2Q5 125 aa18.36■□□□□ 0.53
SHANK2-220ENST00000608988 ZNF883P0CG24 379 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 PMCHP20382 165 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms