RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 H0YIZ8 118 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 M0QZK8 103 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 SHOXO15266 292 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 ARPC5O15511 151 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 ST8SIA3O43173 380 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 FGF16O43320 207 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 DEDDO75618 318 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 LYL1P12980 280 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 TMEM177Q53S58 311 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 KPRPQ5T749 579 aaPredicted RBP9.08□□□□□ -0.96
LINC00539-204ENST00000608957 TMEM65Q6PI78 240 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 SSX9Q7RTT3 188 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 FOXRED2Q8IWF2 684 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 DCUN1D4Q92564 292 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 FLYWCH2Q96CP2 140 aaKnown RBP9.08□□□□□ -0.96
LINC00539-204ENST00000608957 HARBI1Q96MB7 349 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 AIFM2Q9BRQ8 373 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 OR5AC2Q9NZP5 309 aa9.08□□□□□ -0.96
LINC00539-204ENST00000608957 RCL1Q9Y2P8 373 aaKnown RBP9.08□□□□□ -0.96
LINC00539-204ENST00000608957 FAM90A26D6RGX4 464 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 WRBO00258 174 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 NXPH3O95157 252 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 IGHG2P01859 326 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
LINC00539-204ENST00000608957 RLN2P04090 185 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 OR9G9P0C7N8 305 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 CD1BP29016 333 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 OXLD1Q5BKU9 147 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
LINC00539-204ENST00000608957 LAMTOR1Q6IAA8 161 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 OR4A47Q6IF82 309 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 C18orf65Q6ZTR6 163 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 ZNF329Q86UD4 541 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 ZNF546Q86UE3 836 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 VKORC1L1Q8N0U8 176 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 RHOVQ96L33 236 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.07□□□□□ -0.96
LINC00539-204ENST00000608957 TNFSF18Q9UNG2 199 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 HSPB11Q9Y547 144 aa9.07□□□□□ -0.96
LINC00539-204ENST00000608957 TCRBV4S1A1TA0A5B7 111 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 PSMB11A5LHX3 300 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 RNF222A6NCQ9 220 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 L7N2F9 121 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 SSSCA1O60232 199 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 RBMXL2O75526 392 aaKnown RBP9.06□□□□□ -0.96
LINC00539-204ENST00000608957 SNAPC5O75971 98 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 SAA1P0DJI8 122 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-204ENST00000608957 PVALBP20472 110 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-204ENST00000608957 F2RL1P55085 397 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 OR2B8PP59922 312 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 RPS16P62249 146 aaKnown RBP9.06□□□□□ -0.96
LINC00539-204ENST00000608957 POLR2GP62487 172 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00539-204ENST00000608957 ID3Q02535 119 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-204ENST00000608957 ETV3LQ6ZN32 361 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 OR4F17Q8NGA8 305 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 OR2T10Q8NGZ9 312 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 RITA1Q96K30 269 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 OR4F4Q96R69 305 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 HSPB9Q9BQS6 159 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 BET1LQ9NYM9 111 aa9.06□□□□□ -0.96
LINC00539-204ENST00000608957 TSSC4Q9Y5U2 329 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-204ENST00000608957 TGP01266 2768 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 C15orf61A6NNL5 157 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 SRRM4A7MD48 611 aaKnown RBP9.05□□□□□ -0.96
LINC00539-204ENST00000608957 E5RGE8 158 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 MOSP00540 346 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 CXCL2P19875 107 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 CNTFRP26992 372 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 VAMP2P63027 116 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 TNFRSF9Q07011 255 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 ZNF345Q14585 488 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 VMA21Q3ZAQ7 101 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 AARDQ4LEZ3 155 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 SLC35E3Q7Z769 313 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
LINC00539-204ENST00000608957 INO80EQ8NBZ0 244 aaPredicted RBP9.05□□□□□ -0.96
LINC00539-204ENST00000608957 OR4X2Q8NGF9 303 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 OR4A16Q8NH70 328 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 VSTM2AQ8TAG5 236 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 QTRT1Q9BXR0 403 aaKnown RBP9.05□□□□□ -0.96
LINC00539-204ENST00000608957 MFFQ9GZY8 342 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 MAGT1Q9H0U3 335 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 C11orf1Q9H5F2 150 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 HSPB7Q9UBY9 170 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 NSG2Q9Y328 171 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 BOLA1Q9Y3E2 137 aa9.05□□□□□ -0.96
LINC00539-204ENST00000608957 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 NCBP2LA6PVI3 153 aaKnown RBP9.04□□□□□ -0.96
LINC00539-204ENST00000608957 UPK2O00526 184 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 SYNGR2O43760 224 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 MED6O75586 246 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 KBTBD11O94819 623 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 C4BPBP20851 252 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 NUP62P37198 522 aaPredicted RBP9.04□□□□□ -0.96
LINC00539-204ENST00000608957 LGALS7P47929 136 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 UBE2KP61086 200 aa9.04□□□□□ -0.96
LINC00539-204ENST00000608957 OR2F1Q13607 317 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms