RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 RNF2Q99496 336 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 FAM234AQ9H0X4 552 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 PLSCR4Q9NRQ2 329 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 UQCR10Q9UDW1 63 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 DUSP13Q9UII6 198 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 TCF19Q9Y242 345 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
CTCFL-219ENST00000608720 CCL25O15444 150 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 NDUFB8O95169 186 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 ADMP35318 185 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 BPIFB3P59826 476 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 Q0VG73 95 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 UBE2V1Q13404 147 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 OR10G8Q8NGN5 311 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 TP53TG3Q9ULZ0 132 aa12.1□□□□□ -0.47
CTCFL-219ENST00000608720 TRAV3A0A0B4J244 114 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 IGHV1-18A0A0C4DH31 117 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 MT-CO2P00403 227 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 PPBPP02775 128 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 TFPI2P48307 235 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 ZNF134P52741 427 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 OR4S2Q8NH73 311 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 TRBV20OR9-2A0A075B6H5 130 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 SCO2A0A1W2PP80 73 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 GCHFRP30047 84 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 TIMP3P35625 211 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 LINC00310P59036 64 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 RHOBP62745 196 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 RAB31Q13636 194 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 FAM169BQ8N8A8 192 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 OCC1Q8TAD7 63 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 DDB2Q92466 427 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 SARAFQ96BY9 339 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 HSPB9Q9BQS6 159 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 RAB9BQ9NP90 201 aa12.09□□□□□ -0.47
CTCFL-219ENST00000608720 GTF3C1Q12789 2109 aa12.08□□□□□ -0.48
CTCFL-219ENST00000608720 SPTBN2O15020 2390 aa12.08□□□□□ -0.48
CTCFL-219ENST00000608720 OTOGLQ3ZCN5 2332 aa12.08□□□□□ -0.48
CTCFL-219ENST00000608720 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
CTCFL-219ENST00000608720 VN1R17PQ8TDU5 208 aa12.08□□□□□ -0.48
CTCFL-219ENST00000608720 A0A1B0GUS0 222 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 OR5G3P0C626 314 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 CCL11P51671 97 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 STPG4Q8N801 248 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-219ENST00000608720 SSMEM1Q8WWF3 244 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 C1orf159Q96HA4 380 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 ENY2Q9NPA8 101 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 ZNF71Q9NQZ8 489 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-219ENST00000608720 CALYQ9NYX4 217 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 LAMTOR2Q9Y2Q5 125 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 YTHDF2Q9Y5A9 579 aaKnown RBP12.07□□□□□ -0.48
CTCFL-219ENST00000608720 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 CACNA1DQ01668 2161 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 GVINP1Q7Z2Y8 2422 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 NPY1RP25929 384 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 CDKN1AP38936 164 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 HSPE1P61604 102 aaKnown RBP12.07□□□□□ -0.48
CTCFL-219ENST00000608720 MMDQ15546 238 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 EFNB3Q15768 340 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 BHLHA15Q7RTS1 189 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-219ENST00000608720 GCSAMQ8N6F7 178 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 SLC24A4Q8NFF2 622 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 UHRF2Q96PU4 802 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
CTCFL-219ENST00000608720 FOXA2Q9Y261 457 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-219ENST00000608720 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 IGHV3OR15-7A0A075B7D8 119 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 A8MXE2 369 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 IGHV3-13P01766 116 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 IGHV3-7P01780 117 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 CRISP2P16562 243 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
CTCFL-219ENST00000608720 STPG3Q8N7X2 389 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 CORO2AQ92828 525 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 C11orf52Q96A22 123 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 TMEM14BQ9NUH8 114 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 DIDO1Q9BTC0 2240 aaKnown RBP12.06□□□□□ -0.48
CTCFL-219ENST00000608720 C9JCJ5 164 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 SERF1AO75920 110 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 REG1AP05451 166 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 CGB3P0DN86 165 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 CGB7P0DN87 165 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 THBS3P49746 956 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 ZNF90Q03938 601 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 Q8N976 141 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 ZNRF1Q8ND25 227 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 FDCSPQ8NFU4 85 aa12.06□□□□□ -0.48
CTCFL-219ENST00000608720 SEPSECSQ9HD40 501 aaKnown RBP12.06□□□□□ -0.48
CTCFL-219ENST00000608720 KNTC1P50748 2209 aa12.05□□□□□ -0.48
CTCFL-219ENST00000608720 SAA2-SAA4A0A096LPE2 208 aa12.05□□□□□ -0.48
CTCFL-219ENST00000608720 TRGV10A0A0A0MS01 117 aa12.05□□□□□ -0.48
CTCFL-219ENST00000608720 AHRRA9YTQ3 701 aa12.05□□□□□ -0.48
CTCFL-219ENST00000608720 FNDC10F2Z333 226 aa12.05□□□□□ -0.48
CTCFL-219ENST00000608720 IGLC2P0DOY2 106 aa12.05□□□□□ -0.48
CTCFL-219ENST00000608720 IGLC3P0DOY3 106 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms