RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 HIF1ANQ9NWT6 349 aa10.46□□□□□ -0.74
CTCFL-218ENST00000608440 MRPL16Q9NX20 251 aaKnown RBP10.46□□□□□ -0.74
CTCFL-218ENST00000608440 OR1A1Q9P1Q5 309 aa10.46□□□□□ -0.74
CTCFL-218ENST00000608440 IL36RNQ9UBH0 155 aa10.46□□□□□ -0.74
CTCFL-218ENST00000608440 ZNF257Q9Y2Q1 563 aa10.46□□□□□ -0.74
CTCFL-218ENST00000608440 R4GN57 208 aa10.46□□□□□ -0.74
CTCFL-218ENST00000608440 MED12Q93074 2177 aa10.46□□□□□ -0.74
CTCFL-218ENST00000608440 J3QR89 54 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 CELA2BP08218 269 aaPredicted RBP10.45□□□□□ -0.74
CTCFL-218ENST00000608440 COX8AP10176 69 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 TMEM249Q2WGJ8 235 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 COX19Q49B96 90 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 GDF5OSQ5U4N7 250 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 FA2HQ7L5A8 372 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 IGHV1-24A0A0C4DH33 117 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 TMEM189A5PLL7 270 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 C10orf142B7Z368 130 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 CRXO43186 299 aaPredicted RBP10.45□□□□□ -0.74
CTCFL-218ENST00000608440 TUSC2O75896 110 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 YPEL5P62699 121 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 SFTPA2Q8IWL1 248 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 NHLRC2Q8NBF2 726 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 PATE1Q8WXA2 126 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 FAM168AQ92567 244 aa10.45□□□□□ -0.74
CTCFL-218ENST00000608440 A0A1W2PPC4 97 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 ZG16O60844 167 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 CRYGCP07315 174 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 FCGR2BP31994 310 aaPredicted RBP10.44□□□□□ -0.74
CTCFL-218ENST00000608440 INSL3P51460 131 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 RBM11P57052 281 aaKnown RBP10.44□□□□□ -0.74
CTCFL-218ENST00000608440 ETDBQ3ZM63 59 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 INO80CQ6PI98 192 aaPredicted RBP10.44□□□□□ -0.74
CTCFL-218ENST00000608440 MTURNQ8N3F0 131 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 ZNF407Q9C0G0 2248 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 NCOA6Q14686 2063 aaPredicted RBP10.44□□□□□ -0.74
CTCFL-218ENST00000608440 HELTA6NFD8 242 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 B5MCH6 92 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 IGLV3-1P01715 115 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 IBA57Q5T440 356 aaKnown RBP10.44□□□□□ -0.74
CTCFL-218ENST00000608440 OOSP2Q86WS3 158 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 SMIM20Q8N5G0 67 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 UBALD1Q8TB05 177 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 MS4A5Q9H3V2 200 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 JPT1Q9UK76 154 aa10.44□□□□□ -0.74
CTCFL-218ENST00000608440 C1orf61Q13536 156 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 BOD1L2Q8IYS8 172 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 MBNL3Q9NUK0 354 aaKnown RBP10.43□□□□□ -0.74
CTCFL-218ENST00000608440 KBTBD11-OT1A0A1B0GTJ5 212 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 OR11H12B2RN74 326 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 M0R135 149 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 FOXH1O75593 365 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 REG1BP48304 166 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 ZNF718Q3SXZ3 478 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 ZNF585BQ52M93 769 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 FGFRL1Q8N441 504 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 OR11H1Q8NG94 326 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 ARPC1AQ92747 370 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 ZNF799Q96GE5 643 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
CTCFL-218ENST00000608440 FRYLO94915 3013 aa10.43□□□□□ -0.74
CTCFL-218ENST00000608440 TRGV10A0A0A0MS01 117 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 SPTY2D1-AS1A0A0U1RR47 76 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 PMS2P5A8MQ11 134 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 C9JCJ5 164 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 SIVA1O15304 175 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 CXorf1O96002 111 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 MT-CO3P00414 261 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 ARL4DP49703 201 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 DAZAP2Q15038 168 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-218ENST00000608440 RSPO1Q2MKA7 263 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-218ENST00000608440 C10orf35Q96D05 121 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 MMABQ96EY8 250 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-218ENST00000608440 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 MAP1LC3CQ9BXW4 147 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 HRASLS2Q9NWW9 162 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 UNC13CQ8NB66 2214 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 DMDP11532 3685 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 A0A1W2PRE2 83 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 IZUMO1RA6ND01 250 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 VWC2LB2RUY7 222 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 KLF7O75840 302 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-218ENST00000608440 ZNF138P52744 262 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 GUSBP1Q15486 140 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 LYSMD4Q5XG99 296 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 Q8N7P7 452 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 TEX45Q8NA69 505 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 OR10D3Q8NH80 312 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 OR2W1Q9Y3N9 320 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 SIT1Q9Y3P8 196 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 WDFY4Q6ZS81 3184 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 TIGITQ495A1 244 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 MIC13Q5XKP0 118 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 LRRC29Q8WV35 223 aa10.42□□□□□ -0.74
CTCFL-218ENST00000608440 TXNDC17Q9BRA2 123 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms