RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 A0A1W2PN81 502 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 IGLC7A0M8Q6 106 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 C5orf51A6NDU8 294 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 SOX15O60248 233 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 PITX3O75364 302 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 IFNA17P01571 189 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 TRAPPC2P0DI81 140 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 TRAPPC2BP0DI82 140 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 SLC25A6P12236 298 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 CHRNA7P36544 502 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 CRIP2P52943 208 aaPredicted RBP6.03□□□□□ -1.44
MSH6-211ENST00000606499 H2BFSP57053 126 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 HSPE1P61604 102 aaKnown RBP6.03□□□□□ -1.44
MSH6-211ENST00000606499 PRCDQ00LT1 54 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 CFHR3Q02985 330 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 WT1-ASQ06250 92 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 TNFRSF9Q07011 255 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 AARDQ4LEZ3 155 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 CXorf66Q5JRM2 361 aaPredicted RBP6.03□□□□□ -1.44
MSH6-211ENST00000606499 HIST2H2BDQ6DRA6 164 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 UNQ5815/PRO19632Q6UWF5 114 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 ZNF329Q86UD4 541 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 KLHDC1Q8N7A1 406 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 ZBTB8BQ8NAP8 495 aaPredicted RBP6.03□□□□□ -1.44
MSH6-211ENST00000606499 OR4D5Q8NGN0 318 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 OR5M8Q8NGP6 311 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 OR1L8Q8NGR8 309 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 OR5B3Q8NH48 314 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 WDR89Q96FK6 387 aaPredicted RBP6.03□□□□□ -1.44
MSH6-211ENST00000606499 SPIN2AQ99865 258 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 SPIN2BQ9BPZ2 258 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 PDCD10Q9BUL8 212 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 WNT10AQ9GZT5 417 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 MAGT1Q9H0U3 335 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 NDUFA4L2Q9NRX3 87 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 FKBP11Q9NYL4 201 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 MGAT4CQ9UBM8 478 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 HSPB7Q9UBY9 170 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 ZNF257Q9Y2Q1 563 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 RNF114Q9Y508 228 aa6.03□□□□□ -1.44
MSH6-211ENST00000606499 hCG_2014768A0A024R1R8 64 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 CLPSL1A2RUU4 121 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 PSMB11A5LHX3 300 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 SCGB1D2O95969 90 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 CXCL3P19876 107 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 PPIFP30405 207 aaKnown RBP6.02□□□□□ -1.45
MSH6-211ENST00000606499 HOXA1P49639 335 aaPredicted RBP6.02□□□□□ -1.45
MSH6-211ENST00000606499 PROK1P58294 105 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 SPCS3P61009 180 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 RRAS2P62070 204 aaPredicted RBP6.02□□□□□ -1.45
MSH6-211ENST00000606499 DEFA5Q01523 94 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 FCN2Q15485 313 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 AKIRIN2Q53H80 203 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 GSG1LQ6UXU4 331 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 Q6ZNX1 250 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 LCNL1Q6ZST4 164 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 OR5T1Q8NG75 326 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 OR11H7Q8NGC8 314 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 MED28Q9H204 178 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 RBKSQ9H477 322 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 PLEKHA3Q9HB20 300 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 GSKIPQ9P0R6 139 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 ZNF580Q9UK33 172 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 TNCP24821 2201 aa6.02□□□□□ -1.45
MSH6-211ENST00000606499 A0A1B0GVG6 124 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 TMEM89A2RUT3 159 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 CEBPZOSA8MTT3 80 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 IGLV1-40P01703 118 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 MBPP02686 304 aaPredicted RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 PRH1P02810 166 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 OR13C7P0DN81 318 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 IAPPP10997 89 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 CTRB1P17538 263 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 PSMB6P28072 239 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 RIPPLY3P57055 190 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 KRTAP10-3P60369 221 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 POLR2GP62487 172 aaKnown RBP eCLIP6.01□□□□□ -1.45
MSH6-211ENST00000606499 SRSF4Q08170 494 aaKnown RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 TMEM267Q0VDI3 215 aaPredicted RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 FOXL1Q12952 345 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 PDLIM3Q53GG5 364 aaPredicted RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 AWAT1Q58HT5 328 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 CTRB2Q6GPI1 263 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 CENPVQ7Z7K6 275 aaPredicted RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 C11orf44Q8N8P7 122 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 OR52E5Q8NH55 327 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 FAM110DQ8TAY7 271 aaPredicted RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 DTD1Q8TEA8 209 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 WIPF2Q8TF74 440 aaPredicted RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 WFDC12Q8WWY7 111 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 TMEM158Q8WZ71 300 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 C2orf50Q96LR7 162 aa6.01□□□□□ -1.45
MSH6-211ENST00000606499 HEYLQ9NQ87 328 aaPredicted RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 RCL1Q9Y2P8 373 aaKnown RBP6.01□□□□□ -1.45
MSH6-211ENST00000606499 NPIPB5A8MRT5 1133 aa6□□□□□ -1.45
MSH6-211ENST00000606499 FAM90A26D6RGX4 464 aa6□□□□□ -1.45
MSH6-211ENST00000606499 H3BP45 60 aa6□□□□□ -1.45
MSH6-211ENST00000606499 WRBO00258 174 aa6□□□□□ -1.45
MSH6-211ENST00000606499 SYNGR2O43760 224 aa6□□□□□ -1.45
MSH6-211ENST00000606499 SSSCA1O60232 199 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms