RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 UBAC2Q8NBM4 344 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 OR4C13Q8NGP0 309 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 CFHR4Q92496 578 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 SMIM8Q96KF7 97 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 NABP2Q9BQ15 211 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 AIFM2Q9BRQ8 373 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 SLC25A33Q9BSK2 321 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 SLC25A32Q9H2D1 315 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 C1RLQ9NZP8 487 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 CUBNO60494 3623 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 BORCS7-ASMTA0A0B4J1R7 106 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 IGHV3-72A0A0B4J1Y9 119 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 H0YJW9 148 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 H7C2Y5 167 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 NMBP08949 121 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 OR9G9P0C7N8 305 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 EBI3Q14213 229 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 PDLIM3Q53GG5 364 aaPredicted RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 TMEM177Q53S58 311 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 ARSJQ5FYB0 599 aaPredicted RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 EIF5AL1Q6IS14 154 aaKnown RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 TMEM219Q86XT9 240 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 PDPNQ86YL7 162 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 STPG2Q8N412 459 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 OR5AN1Q8NGI8 311 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 OR52E5Q8NH55 327 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 OR4A16Q8NH70 328 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 SPATA3Q8NHX4 192 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 OSR1Q8TAX0 266 aaPredicted RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 PIFOQ8TCI5 191 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 BSCL2Q96G97 398 aaPredicted RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 RBM14Q96PK6 669 aaKnown RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 CIB3Q96Q77 187 aaPredicted RBP8.05□□□□□ -1.12
UPF1-213ENST00000601981 ARV1Q9H2C2 271 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 RBKSQ9H477 322 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 TMEM140Q9NV12 185 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 PSENENQ9NZ42 101 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 KIAA1456Q9P272 454 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 MOB4Q9Y3A3 225 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 WASHC3Q9Y3C0 194 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 ATRQ13535 2644 aa8.05□□□□□ -1.12
UPF1-213ENST00000601981 A0A1B0GUS0 222 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 C15orf61A6NNL5 157 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 FGF16O43320 207 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 RBMXL2O75526 392 aaKnown RBP8.04□□□□□ -1.12
UPF1-213ENST00000601981 SCAF4O95104 1147 aaKnown RBP8.04□□□□□ -1.12
UPF1-213ENST00000601981 IAPPP10997 89 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 CD24P25063 80 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 SULT1A1P50225 295 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 SPCS3P61009 180 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 RELBQ01201 579 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 NHLH2Q02577 135 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 FOXL1Q12952 345 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 ZNF266Q14584 549 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 SSX9Q7RTT3 188 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 ZNF429Q86V71 674 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 OR4F5Q8NH21 305 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 LRRC20Q8TCA0 184 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 DTD1Q8TEA8 209 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 EAF1Q96JC9 268 aaPredicted RBP8.04□□□□□ -1.12
UPF1-213ENST00000601981 RHOVQ96L33 236 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 RNF5Q99942 180 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 SMIM3Q9BZL3 60 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 PRSS22Q9GZN4 317 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 WFDC1Q9HC57 220 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 MED9Q9NWA0 146 aa8.04□□□□□ -1.12
UPF1-213ENST00000601981 FOXA2Q9Y261 457 aaPredicted RBP8.04□□□□□ -1.12
UPF1-213ENST00000601981 NCBP2LA6PVI3 153 aaKnown RBP8.03□□□□□ -1.12
UPF1-213ENST00000601981 H3BP45 60 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 DFFBO76075 338 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 NDUFA7O95182 113 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 IL6RP08887 468 aaPredicted RBP8.03□□□□□ -1.12
UPF1-213ENST00000601981 OR2B8PP59922 312 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 SRSF2Q01130 221 aaKnown RBP8.03□□□□□ -1.12
UPF1-213ENST00000601981 HNF4GQ14541 408 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 MMDQ15546 238 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 OR4A47Q6IF82 309 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 TMEM14EPQ6UXP3 125 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.03□□□□□ -1.12
UPF1-213ENST00000601981 OR1S2Q8NGQ3 325 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 OR5C1Q8NGR4 320 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 OR2T6Q8NHC8 308 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 FLYWCH2Q96CP2 140 aaKnown RBP8.03□□□□□ -1.12
UPF1-213ENST00000601981 RASL11BQ9BPW5 248 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 GINS3Q9BRX5 216 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 C19orf24Q9BVV8 132 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 QTRT1Q9BXR0 403 aaKnown RBP8.03□□□□□ -1.12
UPF1-213ENST00000601981 TMEM14BQ9NUH8 114 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 BET1LQ9NYM9 111 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 PRNDQ9UKY0 176 aa8.03□□□□□ -1.12
UPF1-213ENST00000601981 COL6A5A8TX70 2615 aa8.02□□□□□ -1.12
UPF1-213ENST00000601981 CEBPZOSA8MTT3 80 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 UPK2O00526 184 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 SHOXO15266 292 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 NBR2O15453 112 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 CST7O76096 145 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 IGKV1-16P04430 117 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 SEC11BP0C7V7 166 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 S100A1P23297 94 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms