RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	FAM71E2	Q8N5Q1	922 aa		10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	SMIM8	Q96KF7	97 aa		10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	RBM14	Q96PK6	669 aa	Known RBP	10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	SRSF8	Q9BRL6	282 aa	Known RBP	10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	C11orf1	Q9H5F2	150 aa		10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	METTL1	Q9UBP6	276 aa	Known RBP	10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	TCF19	Q9Y242	345 aa		10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	NSG2	Q9Y328	171 aa		10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	WSB1	Q9Y6I7	421 aa		10.17	□□□□□ -0.78
CELF4-222	ENST00000601392	TRAV3	A0A0B4J244	114 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392		A6NDX4	124 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	DNAJC9-AS1	A6NH13	148 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392		H0YIZ8	118 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392		M0QZK8	103 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	WRB	O00258	174 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	CHST1	O43916	411 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	GPR137B	O60478	399 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	RBMXL2	O75526	392 aa	Known RBP	10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	IER3	P46695	156 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	P2RY1	P47900	373 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	AP2S1	P53680	142 aa	Predicted RBP	10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	DEFB112	Q30KQ8	113 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	ZNF562	Q6V9R5	426 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.16	□□□□□ -0.78
CELF4-222	ENST00000601392		Q8N9W7	124 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	OR1L8	Q8NGR8	309 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	QTRT1	Q9BXR0	403 aa	Known RBP	10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	COMMD5	Q9GZQ3	224 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	ESM1	Q9NQ30	184 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	NDUFA4L2	Q9NRX3	87 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	OR51B2	Q9Y5P1	312 aa		10.16	□□□□□ -0.78
CELF4-222	ENST00000601392	TEX50	A0A1B0GTY4	177 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	BCL2L11	O43521	198 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	IFNA17	P01571	189 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	CD24	P25063	80 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	PAX6	P26367	422 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	CNTFR	P26992	372 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	POLR2G	P62487	172 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	PRCD	Q00LT1	54 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	HNF4G	Q14541	408 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	TMEM86B	Q8N661	226 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	ZNF680	Q8NEM1	530 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	ZDHHC16	Q969W1	377 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	AQP10	Q96PS8	301 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	DUX5	Q96PT3	197 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	ARPC5L	Q9BPX5	153 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	FBXL15	Q9H469	300 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	RBKS	Q9H477	322 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	UBQLN2	Q9UHD9	624 aa		10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	RCL1	Q9Y2P8	373 aa	Known RBP	10.15	□□□□□ -0.78
CELF4-222	ENST00000601392	LSM5	Q9Y4Y9	91 aa	Known RBP	10.15	□□□□□ -0.78
CELF4-222	ENST00000601392		A0A1W2PN81	502 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	RNF222	A6NCQ9	220 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	NCBP2L	A6PVI3	153 aa	Known RBP	10.14	□□□□□ -0.79
CELF4-222	ENST00000601392		H3BUX3	64 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	TAAR5	O14804	337 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	ACTL6B	O94805	426 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	SCAF4	O95104	1147 aa	Known RBP	10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	SCGB1D2	O95969	90 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	HLA-DRB1	P01911	266 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	CHRNA7	P36544	502 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	VDAC2	P45880	294 aa	Predicted RBP	10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	PAX9	P55771	341 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	RAB14	P61106	215 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	RPL23A	P62750	156 aa	Known RBP	10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	EIF5A	P63241	154 aa	Known RBP	10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	RPP30	P78346	268 aa	Known RBP	10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	MRPL41	Q8IXM3	137 aa	Known RBP	10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	C3orf56	Q8N813	242 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	DTD1	Q8TEA8	209 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	SSMEM1	Q8WWF3	244 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	RASL11B	Q9BPW5	248 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	HIPK2	Q9H2X6	1198 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	ZC4H2	Q9NQZ6	224 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	MOB4	Q9Y3A3	225 aa		10.14	□□□□□ -0.79
CELF4-222	ENST00000601392	BTBD17	A6NE02	478 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	CEBPZOS	A8MTT3	80 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	COMP	P49747	757 aa	Predicted RBP	10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	OR2B8P	P59922	312 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	VAMP2	P63027	116 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	PLGLA	Q15195	96 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	OR2C3	Q8N628	320 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	C5orf56	Q8N8D9	126 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	ZNF48	Q96MX3	618 aa	Predicted RBP	10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	CLCC1	Q96S66	551 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	SLC25A31	Q9H0C2	315 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	MAGT1	Q9H0U3	335 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	LYRM2	Q9NU23	88 aa	Predicted RBP	10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	OR5AC2	Q9NZP5	309 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	SOX21	Q9Y651	276 aa	Predicted RBP	10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	ANK2	Q01484	3957 aa		10.13	□□□□□ -0.79
CELF4-222	ENST00000601392	NBEAL1	Q6ZS30	2694 aa		10.12	□□□□□ -0.79
CELF4-222	ENST00000601392	MDFIC2	A0A1B0GVS7	189 aa		10.12	□□□□□ -0.79
CELF4-222	ENST00000601392	TMEM89	A2RUT3	159 aa		10.12	□□□□□ -0.79
CELF4-222	ENST00000601392	FCN1	O00602	326 aa		10.12	□□□□□ -0.79
CELF4-222	ENST00000601392	TMEM50A	O95807	157 aa		10.12	□□□□□ -0.79
CELF4-222	ENST00000601392	RPL27A	P46776	148 aa	Known RBP	10.12	□□□□□ -0.79
CELF4-222	ENST00000601392	CX3CL1	P78423	397 aa		10.12	□□□□□ -0.79
CELF4-222	ENST00000601392	PJVK	Q0ZLH3	352 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms