RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SERPINE2P07093 398 aa17.08■□□□□ 0.32
SSBP4-209ENST00000601357 TRAPPC2P0DI81 140 aa17.08■□□□□ 0.32
SSBP4-209ENST00000601357 TRAPPC2BP0DI82 140 aa17.08■□□□□ 0.32
SSBP4-209ENST00000601357 RORCP51449 518 aa17.08■□□□□ 0.32
SSBP4-209ENST00000601357 LINC00322Q6ZN03 302 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-209ENST00000601357 NAA50Q9GZZ1 169 aaKnown RBP17.08■□□□□ 0.32
SSBP4-209ENST00000601357 FAM212BQ9NTI7 297 aaPredicted RBP17.08■□□□□ 0.32
SSBP4-209ENST00000601357 PTBP1P26599 531 aaKnown RBP eCLIP17.07■□□□□ 0.32
SSBP4-209ENST00000601357 G6PCP35575 357 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 CD81P60033 236 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 FAM106AQ4KMX7 169 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 LPCAT3Q6P1A2 487 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 OR1L8Q8NGR8 309 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 CACNG8Q8WXS5 425 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 NEURL2Q9BR09 285 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 TUBA4BQ9H853 241 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 THYN1Q9P016 225 aa17.07■□□□□ 0.32
SSBP4-209ENST00000601357 OR13C7P0DN81 318 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 UCP3P55916 312 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 TSPAN5P62079 268 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 PHLDA2Q53GA4 152 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 CASC10Q5T4H9 136 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 VN1R17PQ8TDU5 208 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 SPATA25Q9BR10 227 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 NSG2Q9Y328 171 aa17.06■□□□□ 0.32
SSBP4-209ENST00000601357 ZNF320A2RRD8 509 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 CD7P09564 240 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 GPR183P32249 361 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 MFAP2P55001 183 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 UNQ9165/PRO28630Q6UXU0 137 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 LSM10Q969L4 123 aaKnown RBP17.05■□□□□ 0.32
SSBP4-209ENST00000601357 WDR89Q96FK6 387 aaPredicted RBP17.05■□□□□ 0.32
SSBP4-209ENST00000601357 EDA2RQ9HAV5 297 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 PLEKHA3Q9HB20 300 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 MLXQ9UH92 298 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 OR51B2Q9Y5P1 312 aa17.05■□□□□ 0.32
SSBP4-209ENST00000601357 DBX1A6NMT0 343 aa17.04■□□□□ 0.32
SSBP4-209ENST00000601357 MZT2AQ6P582 158 aa17.04■□□□□ 0.32
SSBP4-209ENST00000601357 TBC1D26Q86UD7 250 aa17.04■□□□□ 0.32
SSBP4-209ENST00000601357 SLC38A6Q8IZM9 456 aa17.04■□□□□ 0.32
SSBP4-209ENST00000601357 TMEM14BQ9NUH8 114 aa17.04■□□□□ 0.32
SSBP4-209ENST00000601357 SLC2A8Q9NY64 477 aa17.04■□□□□ 0.32
SSBP4-209ENST00000601357 PRNDQ9UKY0 176 aa17.04■□□□□ 0.32
SSBP4-209ENST00000601357 F11RQ9Y624 299 aaKnown RBP17.04■□□□□ 0.32
SSBP4-209ENST00000601357 CYB5BO43169 146 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 SNAPC5O75971 98 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 TPPPO94811 219 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 C8orf88P0DMB2 117 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 ZNF182P17025 639 aaPredicted RBP17.03■□□□□ 0.32
SSBP4-209ENST00000601357 TMEM61Q8N0U2 210 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 UXS1Q8NBZ7 420 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 OR5B3Q8NH48 314 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 AP3S1Q92572 193 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 SEC22AQ96IW7 307 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 ZNF436Q9C0F3 470 aaPredicted RBP17.03■□□□□ 0.32
SSBP4-209ENST00000601357 KLK11Q9UBX7 282 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 CSMD3Q7Z407 3707 aa17.03■□□□□ 0.32
SSBP4-209ENST00000601357 C15orf61A6NNL5 157 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 M0QYG6 137 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 IGKV1-39P01597 117 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 IGKV1D-39P04432 117 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 S100GP29377 79 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 GUCA2BQ16661 112 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 TM4SF20Q53R12 229 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 ATP6V0BQ99437 205 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 TSC22D3Q99576 134 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 FKBP11Q9NYL4 201 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 CEPT1Q9Y6K0 416 aa17.02■□□□□ 0.32
SSBP4-209ENST00000601357 STARD9Q9P2P6 4700 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 FAM25AB3EWG3 89 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 FAM25CB3EWG5 89 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 FAM25GB3EWG6 89 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 TGOLN2O43493 480 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 ELLP55199 621 aaPredicted RBP17.01■□□□□ 0.31
SSBP4-209ENST00000601357 GPR107Q5VW38 600 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 ZNF57Q68EA5 555 aaPredicted RBP17.01■□□□□ 0.31
SSBP4-209ENST00000601357 SLC25A24Q6NUK1 477 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 PLET1Q6UQ28 207 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 DEFB125Q8N687 156 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 HINT2Q9BX68 163 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 WFDC10AQ9H1F0 79 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 PALMDQ9NP74 551 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 SELENOKQ9Y6D0 94 aa17.01■□□□□ 0.31
SSBP4-209ENST00000601357 RBMY1BA6NDE4 496 aaKnown RBP17■□□□□ 0.31
SSBP4-209ENST00000601357 RBMY1EA6NEQ0 496 aaKnown RBP17■□□□□ 0.31
SSBP4-209ENST00000601357 F8W735 103 aaPredicted RBP17■□□□□ 0.31
SSBP4-209ENST00000601357 RBMY1DP0C7P1 496 aaKnown RBP17■□□□□ 0.31
SSBP4-209ENST00000601357 LYL1P12980 280 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 LHFPL1Q86WI0 220 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 OR52I2Q8NH67 350 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 MARC2Q969Z3 335 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 BSCL2Q96G97 398 aaPredicted RBP17■□□□□ 0.31
SSBP4-209ENST00000601357 TMEM56Q96MV1 263 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 EXTL2Q9UBQ6 330 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 MTFP1Q9UDX5 166 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 RYR2Q92736 4967 aa17■□□□□ 0.31
SSBP4-209ENST00000601357 IGHV3-35A0A0C4DH35 117 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 OR2T8A6NH00 312 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 OR11H12B2RN74 326 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 K7EIM0 57 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms