RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 C15orf61A6NNL5 157 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 B3GALNT1O75752 331 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 ACTL6BO94805 426 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 CDS2O95674 445 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 KRASP01116 189 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 IGKV1-5P01602 117 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 IGLV1-51P01701 117 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 PRH1P02810 166 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 IFNA6P05013 189 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 SERPINE2P07093 398 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 CTSDP07339 412 aaPredicted RBP6.71□□□□□ -1.34
SSBP4-208ENST00000600628 AKAIN1P0CW23 69 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 ZP3P21754 424 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 G6PCP35575 357 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 ECI1P42126 302 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 MFAP2P55001 183 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 PIGPP57054 158 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 KLF9Q13886 244 aaPredicted RBP6.71□□□□□ -1.34
SSBP4-208ENST00000600628 IL18Q14116 193 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 RNASE12Q5GAN4 147 aaKnown RBP6.71□□□□□ -1.34
SSBP4-208ENST00000600628 FAM209BQ5JX69 171 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 FAAP20Q6NZ36 180 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 ADAMTSL5Q6ZMM2 481 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 HSD17B13Q7Z5P4 300 aaPredicted RBP6.71□□□□□ -1.34
SSBP4-208ENST00000600628 ZNF429Q86V71 674 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 GDPD1Q8N9F7 314 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 ZNF114Q8NC26 417 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 OR10W1Q8NGF6 305 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 OR1L8Q8NGR8 309 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 OR5B3Q8NH48 314 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 ZFAND1Q8TCF1 268 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 GLYATL2Q8WU03 294 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 GALNT14Q96FL9 552 aa6.71□□□□□ -1.34
SSBP4-208ENST00000600628 THAP7Q9BT49 309 aaPredicted RBP6.71□□□□□ -1.34
SSBP4-208ENST00000600628 PEF1Q9UBV8 284 aaKnown RBP6.71□□□□□ -1.34
SSBP4-208ENST00000600628 NBEAL2Q6ZNJ1 2754 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 A0A0B4J293 547 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 FABP12A6NFH5 140 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
SSBP4-208ENST00000600628 NOL3O60936 208 aaKnown RBP6.7□□□□□ -1.34
SSBP4-208ENST00000600628 NDUFB8O95169 186 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 TRAPPC2P0DI81 140 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 TRAPPC2BP0DI82 140 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 PI3P19957 117 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 DEFA5Q01523 94 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 C15orf32Q32M92 178 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 DMBX1Q8NFW5 382 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 OR51S1Q8NGJ8 323 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 MARCH1Q8TCQ1 289 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 TMEM230Q96A57 120 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 ATP6V0BQ99437 205 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 PHB2Q99623 299 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 SDHCQ99643 169 aaPredicted RBP6.7□□□□□ -1.34
SSBP4-208ENST00000600628 COMMD5Q9GZQ3 224 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 TMEM222Q9H0R3 208 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 HRASLSQ9HDD0 168 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 PRNDQ9UKY0 176 aa6.7□□□□□ -1.34
SSBP4-208ENST00000600628 C3orf85A0A1B0GTC6 90 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 CRYM-AS1A6NIL9 109 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 LGALS9O00182 355 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 HIST1H1BP16401 226 aaKnown RBP6.69□□□□□ -1.34
SSBP4-208ENST00000600628 S100GP29377 79 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 ERVK-16P61578 105 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 SUPT4H1P63272 117 aaKnown RBP6.69□□□□□ -1.34
SSBP4-208ENST00000600628 ATP5G2Q06055 141 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 DCTN2Q13561 401 aaKnown RBP6.69□□□□□ -1.34
SSBP4-208ENST00000600628 EXOSC2Q13868 293 aaKnown RBP6.69□□□□□ -1.34
SSBP4-208ENST00000600628 Q6ZRM9 215 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 GPHB5Q86YW7 130 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 OR6Q1Q8NGQ2 317 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 LHFPL5Q8TAF8 219 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 ZNF502Q8TBZ5 544 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 TMEM56Q96MV1 263 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 PRRT1Q99946 306 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 SRRQ9GZT4 340 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 FKBP11Q9NYL4 201 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 NSG2Q9Y328 171 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 OR51B2Q9Y5P1 312 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 F11RQ9Y624 299 aaKnown RBP6.69□□□□□ -1.34
SSBP4-208ENST00000600628 TMEM56-RWDD3S4R434 201 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
SSBP4-208ENST00000600628 TRBV7-1A0A0A6YYK4 115 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 A0A0G2JRQ6 117 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 MFSD2BA6NFX1 497 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 A8MWP6 167 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 DISC1C4P0D8 188 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 K7EIM0 57 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 OR2J3O76001 311 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 DHFRP00374 187 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 CSN3P07498 182 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 FCGR2BP31994 310 aaPredicted RBP6.68□□□□□ -1.34
SSBP4-208ENST00000600628 PPP5CP53041 499 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 HSPE1P61604 102 aaKnown RBP6.68□□□□□ -1.34
SSBP4-208ENST00000600628 PRCDQ00LT1 54 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 BSXQ3C1V8 233 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 Q8N402 240 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 OR2C3Q8N628 320 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 OR9G4Q8NGQ1 327 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 VN1R17PQ8TDU5 208 aa6.68□□□□□ -1.34
SSBP4-208ENST00000600628 LSM10Q969L4 123 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms