RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ISOC1Q96CN7 298 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 PALMDQ9NP74 551 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 COMMD3Q9UBI1 195 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 S4R3C0 116 aa11.92□□□□□ -0.5
VRK3-221ENST00000600284 ZNF320A2RRD8 509 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 TMEM213A2RRL7 107 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 SERPINE2P07093 398 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 HLA-DMAP28067 261 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 ELLP55199 621 aaPredicted RBP11.91□□□□□ -0.5
VRK3-221ENST00000600284 NCS1P62166 190 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 FCAMRQ8WWV6 532 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 MARC2Q969Z3 335 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 FKBP11Q9NYL4 201 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 CEPT1Q9Y6K0 416 aa11.91□□□□□ -0.5
VRK3-221ENST00000600284 SNAPC5O75971 98 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 KRASP01116 189 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 CD7P09564 240 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 C8orf88P0DMB2 117 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 OR13C7P0DN81 318 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 RCVRNP35243 200 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 RORCP51449 518 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 UCP3P55916 312 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 VBP1P61758 197 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 TSPAN5P62079 268 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 WT1-ASQ06250 92 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 GUCA2BQ16661 112 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 ZNF57Q68EA5 555 aaPredicted RBP11.9□□□□□ -0.5
VRK3-221ENST00000600284 PLET1Q6UQ28 207 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 SLC16A13Q7RTY0 426 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 UXS1Q8NBZ7 420 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 OR10W1Q8NGF6 305 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 OR1L6Q8NGR2 347 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 OR5B3Q8NH48 314 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 LSM10Q969L4 123 aaKnown RBP11.9□□□□□ -0.5
VRK3-221ENST00000600284 TSC22D3Q99576 134 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 PLEKHA3Q9HB20 300 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 PRNDQ9UKY0 176 aa11.9□□□□□ -0.5
VRK3-221ENST00000600284 TRAV25A0A0B4J276 109 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 OR11H12B2RN74 326 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 RPA2P15927 270 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 EDN2P20800 178 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 GPR183P32249 361 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 ANKRD55Q3KP44 614 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 SLC25A24Q6NUK1 477 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
VRK3-221ENST00000600284 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 ZNF436Q9C0F3 470 aaPredicted RBP11.89□□□□□ -0.51
VRK3-221ENST00000600284 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
VRK3-221ENST00000600284 UFC1Q9Y3C8 167 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 OR51B2Q9Y5P1 312 aa11.89□□□□□ -0.51
VRK3-221ENST00000600284 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
VRK3-221ENST00000600284 ELK1P19419 428 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 G6PCP35575 357 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 MZT2AQ6P582 158 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 SPSB3Q6PJ21 355 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 SLC38A6Q8IZM9 456 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 DEFB125Q8N687 156 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 CACNG8Q8WXS5 425 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 BSCL2Q96G97 398 aaPredicted RBP11.88□□□□□ -0.51
VRK3-221ENST00000600284 HIPK2Q9H2X6 1198 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 MLXQ9UH92 298 aa11.88□□□□□ -0.51
VRK3-221ENST00000600284 TGOLN2O43493 480 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 HPGDSO60760 199 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 PHLDA2Q53GA4 152 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 TM4SF20Q53R12 229 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 AP3S1Q92572 193 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 TMEM14BQ9NUH8 114 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
VRK3-221ENST00000600284 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
VRK3-221ENST00000600284 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
VRK3-221ENST00000600284 C15orf61A6NNL5 157 aa11.86□□□□□ -0.51
VRK3-221ENST00000600284 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
VRK3-221ENST00000600284 SEC22AQ96IW7 307 aa11.86□□□□□ -0.51
VRK3-221ENST00000600284 HINT2Q9BX68 163 aa11.86□□□□□ -0.51
VRK3-221ENST00000600284 C21orf62Q9NYP8 219 aa11.86□□□□□ -0.51
VRK3-221ENST00000600284 FAM25AB3EWG3 89 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 FAM25CB3EWG5 89 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 FAM25GB3EWG6 89 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 GABARAPO95166 117 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 ZNF182P17025 639 aaPredicted RBP11.85□□□□□ -0.51
VRK3-221ENST00000600284 MFAP2P55001 183 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 RBPMS2Q6ZRY4 209 aaKnown RBP11.85□□□□□ -0.51
VRK3-221ENST00000600284 OR52B4Q8NGK2 314 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 OR1P1Q8NH06 330 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 IL17DQ8TAD2 202 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 SCARB1Q8WTV0 552 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 C15orf40Q8WUR7 153 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 TMEM190Q8WZ59 177 aa11.85□□□□□ -0.51
VRK3-221ENST00000600284 ZNF486Q96H40 463 aaPredicted RBP11.85□□□□□ -0.51
VRK3-221ENST00000600284 C5orf66Q9H5L9 145 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms