RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PSMG3Q9BT73 122 aaPredicted RBP9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 IL19Q9UHD0 177 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 A0A1B0GUS0 222 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 NKX6-3A6NJ46 265 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 YPEL1O60688 119 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 TNFRSF1AP19438 455 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 MLANAQ16655 118 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 FAM90A2PQ658T7 463 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 OR4X1Q8NH49 305 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 CHRNB4P30926 498 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 ERASQ7Z444 233 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 FAM103A1Q9BTL3 118 aaKnown RBP9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 SIRT7Q9NRC8 400 aa9.49□□□□□ -0.89
ARHGEF1-220ENST00000600274 C11orf94C9JXX5 98 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 LY6HO94772 140 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 CEACAM8P31997 349 aaPredicted RBP9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 ATP5G3P48201 142 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 ACOT6Q3I5F7 207 aaPredicted RBP9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 ARHGAP32A7KAX9 2087 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 C17orf100A8MU93 164 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 EREGO14944 169 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 PLAUP00749 431 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 NPY1RP25929 384 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 SPCS3P61009 180 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 DIAPH2-AS1Q14236 149 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 Q8NA96 180 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 OR10W1Q8NGF6 305 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 ACY3Q96HD9 319 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 IDI2-AS1Q9NZ38 188 aa9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 CISD1Q9NZ45 108 aaKnown RBP9.48□□□□□ -0.89
ARHGEF1-220ENST00000600274 IGLV3-9A0A075B6K5 115 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 IGHV3-21A0A0B4J1V1 117 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 hADV38S2A0JD32 116 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 J3QR06 171 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 CD81P60033 236 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PRSS8Q16651 343 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 REC114Q7Z4M0 266 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 FAM216AQ8WUB2 273 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PARLQ9H300 379 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PRDM13Q9H4Q3 707 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 OR51B2Q9Y5P1 312 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PXMP4Q9Y6I8 212 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 CSMD1Q96PZ7 3565 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PPIAL4EA0A075B759 164 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PPIAL4DF5H284 164 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 TCF21O43680 179 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 CA2P00918 260 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PPIAL4FP0DN26 164 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 GRNP28799 593 aaKnown RBP9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 RAB7AP51149 207 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 RELBQ01201 579 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 EIF4EBP1Q13541 118 aaPredicted RBP9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 TBR1Q16650 682 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 ATP6V1FQ16864 119 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 STUMQ69YW2 141 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 DPPA3Q6W0C5 159 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 SLC35E3Q7Z769 313 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 HARBI1Q96MB7 349 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 MRPL20Q9BYC9 149 aaKnown RBP9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 RNF24Q9Y225 148 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PPIAL4AQ9Y536 164 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PIEZO1Q92508 2521 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 CBY3A6NI87 242 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 REG1AP05451 166 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 THBS3P49746 956 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 SPATA31B1PQ5VZV4 182 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 SLC24A4Q8NFF2 622 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PLEKHA3Q9HB20 300 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 PITPNC1Q9UKF7 332 aa9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
ARHGEF1-220ENST00000600274 A0A1W2PRD5 423 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 A0A1W2PRF3 423 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 A0A1W2PRM7 423 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 NDUFB4O95168 129 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 LHBP01229 141 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 THBDP07204 575 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 P0C879 139 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 ARL14EPLP0DKL9 152 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 PAX6P26367 422 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 TFPI2P48307 235 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 NUBP1P53384 320 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 TAS2R60P59551 318 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 TREML4Q6UXN2 200 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 MBD3L1Q8WWY6 194 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 IGFBPL1Q8WX77 278 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 SAMD10Q9BYL1 202 aa9.46□□□□□ -0.89
ARHGEF1-220ENST00000600274 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 PMS2P5A8MQ11 134 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 NDUFB3O43676 98 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 GFRA3O60609 400 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 COX7A1P24310 79 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 RTL8BQ17RB0 113 aa9.46□□□□□ -0.9
ARHGEF1-220ENST00000600274 TCF23Q7RTU1 214 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms