RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 ZNF837Q96EG3 531 aaPredicted RBP12.24□□□□□ -0.45
SYMPK-215ENST00000600237 TCTAP57738 103 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 ZFP36L1Q07352 338 aaKnown RBP12.23□□□□□ -0.45
SYMPK-215ENST00000600237 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 HIST1H4GQ99525 98 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 TMEM106BQ9NUM4 274 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 IGKV1-9A0A0C4DH69 117 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 LOC107984156A0A0G2JMH3 177 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 TFPI2P48307 235 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 ATP5G2Q06055 141 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 MBNL2Q5VZF2 373 aaKnown RBP12.23□□□□□ -0.45
SYMPK-215ENST00000600237 ATRAIDQ6UW56 229 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 ARL17AQ8IVW1 177 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 EEF1AKMT3Q96AZ1 226 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 WBP1Q96G27 269 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 C18orf12Q96KH6 178 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 H3BTX0 84 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 CGAP01215 116 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 UMODP07911 640 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 TSPOP30536 169 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
SYMPK-215ENST00000600237 TFF3Q07654 80 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 FAM131CQ96AQ9 280 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 C9orf172C9J069 976 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 TAS2R60P59551 318 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 C19orf54Q5BKX5 351 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 PAPPA-AS1Q5QFB9 102 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
SYMPK-215ENST00000600237 MDC1Q14676 2089 aaKnown RBP12.22□□□□□ -0.45
SYMPK-215ENST00000600237 CGB1A6NKQ9 187 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 PRR32B1ATL7 298 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 FGF16O43320 207 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 IGFBP2P18065 325 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 RNASEH2CQ8TDP1 164 aaKnown RBP12.22□□□□□ -0.45
SYMPK-215ENST00000600237 PARD6GQ9BYG4 376 aaPredicted RBP12.22□□□□□ -0.45
SYMPK-215ENST00000600237 RALGAPA1Q6GYQ0 2036 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 PEX7O00628 323 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.453e-21■■■■■ 80.7
SYMPK-215ENST00000600237 IGHV3-48P01763 117 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 HOXA5P20719 270 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 WFIKKN1Q96NZ8 548 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 DPM3Q9P2X0 92 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 LCTP09848 1927 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 IGHV2OR16-5A0A0B4J2B6 119 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 TBR1Q16650 682 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 PSMG4Q5JS54 123 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 DNLZQ5SXM8 178 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 INTS1Q8N201 2190 aaKnown RBP12.22□□□□□ -0.45
SYMPK-215ENST00000600237 DICER1Q9UPY3 1922 aaKnown RBP12.22□□□□□ -0.45
SYMPK-215ENST00000600237 GPX1P07203 203 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 ATP5J2P56134 94 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 ICAM4Q14773 271 aa12.22□□□□□ -0.45
SYMPK-215ENST00000600237 PEAR1Q5VY43 1037 aaPredicted RBP12.22□□□□□ -0.45
SYMPK-215ENST00000600237 FOXH1O75593 365 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 OR4D5Q8NGN0 318 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
SYMPK-215ENST00000600237 ID3Q02535 119 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 Q6AWC8 147 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 PAQR4Q8N4S7 273 aaPredicted RBP12.21□□□□□ -0.45
SYMPK-215ENST00000600237 LRTM2Q8N967 370 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 AUP1Q9Y679 476 aa12.21□□□□□ -0.45
SYMPK-215ENST00000600237 H0YIZ8 118 aa12.21□□□□□ -0.46
SYMPK-215ENST00000600237 CD59P13987 128 aa12.21□□□□□ -0.46
SYMPK-215ENST00000600237 FAM57AQ8TBR7 257 aa12.21□□□□□ -0.46
SYMPK-215ENST00000600237 HERPUD1Q15011 391 aa12.21□□□□□ -0.46
SYMPK-215ENST00000600237 ACSF3Q4G176 576 aaPredicted RBP12.21□□□□□ -0.46
SYMPK-215ENST00000600237 GPR82Q96P67 336 aa12.21□□□□□ -0.46
SYMPK-215ENST00000600237 LINC00312Q9Y6C7 94 aa12.21□□□□□ -0.46
SYMPK-215ENST00000600237 A0A1B0GW15 77 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 A0A0G2JMM0 328 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 SCO2A0A1W2PP80 73 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 A0A1W2PPB8 328 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 A0A1W2PRS3 328 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 KIR3DP1A8MWS1 328 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 NTN3O00634 580 aaPredicted RBP12.2□□□□□ -0.46
SYMPK-215ENST00000600237 A0A1B0GUT8 65 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
SYMPK-215ENST00000600237 ATP5G3P48201 142 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 FAM216BQ8N7L0 139 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 OR52E5Q8NH55 327 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 COPS9Q8WXC6 57 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 RAXQ9Y2V3 346 aa12.2□□□□□ -0.46
SYMPK-215ENST00000600237 TRBV20OR9-2A0A075B6H5 130 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 SLC17A3O00476 420 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 YPEL1O60688 119 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 JOSD1Q15040 202 aaPredicted RBP12.19□□□□□ -0.46
SYMPK-215ENST00000600237 TMEM136Q6ZRR5 245 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 ZNF414Q96IQ9 312 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 YPEL2Q96QA6 119 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 GFI1Q99684 422 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 RTN4RQ9BZR6 473 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 IGKV1D-13A0A0B4J2D9 117 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 IGKV1-13P0DP09 117 aa12.19□□□□□ -0.46
SYMPK-215ENST00000600237 LGALS3P17931 250 aaKnown RBP12.19□□□□□ -0.46
SYMPK-215ENST00000600237 IGHV1-2P23083 117 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms