RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 UBE2KP61086 200 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 HES1Q14469 280 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 PSG5Q15238 335 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 MRGPRG-AS1Q2M3A8 158 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 LYZL2Q7Z4W2 148 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 SLC35G3Q8N808 338 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 LSM10Q969L4 123 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 RHOVQ96L33 236 aa10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 TSNAXQ99598 290 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-218ENST00000598907 A0A0G2JRQ6 117 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 NBR2O15453 112 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 SLC25A17O43808 307 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 ATG12O94817 140 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 KRASP01116 189 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 VDAC1P21796 283 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 G6PCP35575 357 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 HNF4GQ14541 408 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 NMSQ5H8A3 153 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 OR4A47Q6IF82 309 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 LIN54Q6MZP7 749 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 FAM219AQ8IW50 185 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 VKORC1L1Q8N0U8 176 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 FAM71E2Q8N5Q1 922 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 Q8N9W7 124 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 TEX45Q8NA69 505 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 BET1LQ9NYM9 111 aa10.77□□□□□ -0.69
SHKBP1-218ENST00000598907 RRHO14718 337 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 OR2A4O95047 310 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 FGF2P09038 288 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 SAA1P0DJI8 122 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 MMDQ15546 238 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 VMA21Q3ZAQ7 101 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 OR4A5Q8NH83 315 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 TMEM167AQ8TBQ9 72 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 GPR146Q96CH1 333 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 OR2A7Q96R45 310 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 TMEM140Q9NV12 185 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 TMED3Q9Y3Q3 217 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 TNCP24821 2201 aa10.76□□□□□ -0.69
SHKBP1-218ENST00000598907 UPK2O00526 184 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 FGF16O43320 207 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 ADAP1O75689 374 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 KBTBD11O94819 623 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 LY6G6CO95867 125 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 ERVK-16P61578 105 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 C5orf64Q2M2E5 130 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 GGNBP1Q5YKI7 109 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 Q6ZRM9 215 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 SSX9Q7RTT3 188 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 DMBX1Q8NFW5 382 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 VSTM2AQ8TAG5 236 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 LINC00476Q8WZB0 136 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 FBXL15Q9H469 300 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 MOB4Q9Y3A3 225 aa10.75□□□□□ -0.69
SHKBP1-218ENST00000598907 TRAV3A0A0B4J244 114 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 RPLP1P05386 114 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 HOXB5P09067 269 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 SULT1A3P0DMM9 295 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 SULT1A4P0DMN0 295 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 SLC25A6P12236 298 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 AKR1C2P52895 323 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 SLC35B1P78383 322 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 IZUMO4Q1ZYL8 232 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 AARDQ4LEZ3 155 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 H2BFWTQ7Z2G1 175 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 C5orf56Q8N8D9 126 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 GATAD1Q8WUU5 269 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 RRNAD1Q96FB5 475 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 TPSG1Q9NRR2 321 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 COA4Q9NYJ1 87 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 KIAA1456Q9P272 454 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 METTL1Q9UBP6 276 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 DNAH10Q8IVF4 4471 aa10.74□□□□□ -0.69
SHKBP1-218ENST00000598907 A0A1B0GU03 582 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 A0A1B0GVG6 124 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 NCBP2LA6PVI3 153 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 MPTX1A8MV57 137 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 M0QZK8 103 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 SSNA1O43805 119 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 PITX3O75364 302 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 RRAS2P62070 204 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 SSBP2P81877 361 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 PRSS8Q16651 343 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 FOXRED2Q8IWF2 684 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 UXS1Q8NBZ7 420 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 OR10C1Q96KK4 312 aa10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 ZNF430Q9H8G1 570 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-218ENST00000598907 FCN1O00602 326 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 IFNA21P01568 189 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 HLA-DRB1P01911 266 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 MAS1LP35410 378 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 PJVKQ0ZLH3 352 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 IL15RAQ13261 267 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 FCN2Q15485 313 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 ZNF429Q86V71 674 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 MMD2Q8IY49 270 aa10.72□□□□□ -0.69
SHKBP1-218ENST00000598907 CHAC2Q8WUX2 184 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms