RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZFP57Q9NU63 452 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 TMEM14BQ9NUH8 114 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 OR51B2Q9Y5P1 312 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 PCLOQ9Y6V0 5065 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 TRAV3A0A0B4J244 114 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 FAM90A26D6RGX4 464 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 CHST1O43916 411 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 MED6O75586 246 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 CCNKO75909 580 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 HLA-DRB1P01911 266 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 PET100P0DJ07 73 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 HOXA1P49639 335 aaPredicted RBP9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 KRTAP10-3P60369 221 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 S100A10P60903 97 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 RAP2BP61225 183 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 C11orf87Q6NUJ2 197 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 Q6ZRM9 215 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 ZNF429Q86V71 674 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 MRPL41Q8IXM3 137 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 OR4D5Q8NGN0 318 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 OR5B3Q8NH48 314 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 MRAPQ8TCY5 172 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 FYTTD1Q96QD9 318 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 HINT2Q9BX68 163 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 NPFFR1Q9GZQ6 430 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 ZNF257Q9Y2Q1 563 aa9.54□□□□□ -0.88
SHKBP1-213ENST00000597325 CEBPZOSA8MTT3 80 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 CLDN34H7C241 214 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 PITX3O75364 302 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 TSPAN15O95858 294 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 IL6RP08887 468 aaPredicted RBP9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 RPL27AP46776 148 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 SPCS3P61009 180 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 TNFRSF9Q07011 255 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 PJVKQ0ZLH3 352 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 FXYD3Q14802 87 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 LRRC37A5PQ49AS3 106 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 ARSJQ5FYB0 599 aaPredicted RBP9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 C9orf152Q5JTZ5 239 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 OR1L8Q8NGR8 309 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 OR52E5Q8NH55 327 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 GRPEL2Q8TAA5 225 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 ARPC1AQ92747 370 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 PLEKHA3Q9HB20 300 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 HSPB7Q9UBY9 170 aa9.53□□□□□ -0.88
SHKBP1-213ENST00000597325 A0A1B0GUS0 222 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 FCN1O00602 326 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 SSSCA1O60232 199 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 GPR137BO60478 399 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 PFDN1O60925 122 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 OPN1MWP04001 364 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 OPN1MW2P0DN77 364 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 OPN1MW3P0DN78 364 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 PVALBP20472 110 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 HSPE1P61604 102 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 PRCDQ00LT1 54 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 FGL1Q08830 312 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 AARDQ4LEZ3 155 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 CXorf66Q5JRM2 361 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 C10orf55Q5SWW7 151 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 SAMD5Q5TGI4 173 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 ZNF562Q6V9R5 426 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 PPP1R1CQ8WVI7 109 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 PARP11Q9NR21 331 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 NOTCH3Q9UM47 2321 aa9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 LSM5Q9Y4Y9 91 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-213ENST00000597325 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 A0A1W2PN81 502 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 SH2D7A6NKC9 451 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 L7N2F9 121 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 SYNGR2O43760 224 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 RLN2P04090 185 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 CRYBA1P05813 215 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 MYOD1P15172 320 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 PSMB6P28072 239 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 CHRNA7P36544 502 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 VAMP2P63027 116 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 CX3CL1P78423 397 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 RAB32Q13637 225 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 SPINK9Q5DT21 86 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 SLC35E3Q7Z769 313 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 OR2T35Q8NGX2 323 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 THAP6Q8TBB0 222 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 DTD1Q8TEA8 209 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 CIB3Q96Q77 187 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 PRSS22Q9GZN4 317 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 MAGT1Q9H0U3 335 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 HIPK2Q9H2X6 1198 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 RBKSQ9H477 322 aa9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 RANGRFQ9HD47 186 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 RCL1Q9Y2P8 373 aaKnown RBP9.51□□□□□ -0.89
SHKBP1-213ENST00000597325 PLXNB1O43157 2135 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 K7EPK0 472 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 LY86O95711 162 aa9.5□□□□□ -0.89
SHKBP1-213ENST00000597325 AMY1AP04745 511 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms