RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 H3BUA1 57 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 SOX15O60248 233 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 RBMXL2O75526 392 aaKnown RBP6.53□□□□□ -1.36
VRK3-211ENST00000596445 DUS4LO95620 317 aaKnown RBP6.53□□□□□ -1.36
VRK3-211ENST00000596445 TRAPPC2P0DI81 140 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 TRAPPC2BP0DI82 140 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 PF4V1P10720 104 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 RAB9AP51151 201 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 MECP2P51608 486 aaKnown RBP6.53□□□□□ -1.36
VRK3-211ENST00000596445 LYZL2Q7Z4W2 148 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 ZNF429Q86V71 674 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 NDUFA11Q86Y39 141 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 TTC9CQ8N5M4 171 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 OR5T1Q8NG75 326 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 FAM110DQ8TAY7 271 aaPredicted RBP6.53□□□□□ -1.36
VRK3-211ENST00000596445 KLK15Q9H2R5 256 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.53□□□□□ -1.36
VRK3-211ENST00000596445 ZFP57Q9NU63 452 aa6.53□□□□□ -1.36
VRK3-211ENST00000596445 TSSC4Q9Y5U2 329 aaPredicted RBP6.53□□□□□ -1.36
VRK3-211ENST00000596445 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 NPIPB5A8MRT5 1133 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 ADARB2-AS1A8MUL3 147 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 BRI3O95415 125 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 RPLP1P05386 114 aaKnown RBP6.52□□□□□ -1.37
VRK3-211ENST00000596445 SULT1A3P0DMM9 295 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 SULT1A4P0DMN0 295 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 HSPE1P61604 102 aaKnown RBP6.52□□□□□ -1.37
VRK3-211ENST00000596445 NSUN5P1Q3KNT7 163 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 AARDQ4LEZ3 155 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 NMSQ5H8A3 153 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 KHDC1LQ5JSQ8 128 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 HIST2H2BDQ6DRA6 164 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 PLET1Q6UQ28 207 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 Q6ZRM9 215 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 HSD17B13Q7Z5P4 300 aaPredicted RBP6.52□□□□□ -1.37
VRK3-211ENST00000596445 OR10W1Q8NGF6 305 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 OR52B4Q8NGK2 314 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 COQ8AQ8NI60 647 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 MYOZ3Q8TDC0 251 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 MITD1Q8WV92 249 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 GPR146Q96CH1 333 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 MARVELD1Q9BSK0 173 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 HINT2Q9BX68 163 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 SLA2Q9H6Q3 261 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 ZNF355PQ9NSJ1 428 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 COA4Q9NYJ1 87 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 CACNG5Q9UF02 275 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 TMED3Q9Y3Q3 217 aa6.52□□□□□ -1.37
VRK3-211ENST00000596445 CMYA5Q8N3K9 4069 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 A0A1B0GU03 582 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 A0A1W2PRX2 142 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 PTTG1O95997 202 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 DHFRP00374 187 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 IFNA17P01571 189 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 IL5P05113 134 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 CRYGCP07315 174 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 OR13C7P0DN81 318 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 SLC25A6P12236 298 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 AREGP15514 252 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 CTRB1P17538 263 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 PSMB6P28072 239 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 CDX1P47902 265 aaPredicted RBP6.51□□□□□ -1.37
VRK3-211ENST00000596445 SPCS3P61009 180 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 RPL23AP62750 156 aaKnown RBP6.51□□□□□ -1.37
VRK3-211ENST00000596445 PRCDQ00LT1 54 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 WT1-ASQ06250 92 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 DCTN2Q13561 401 aaKnown RBP6.51□□□□□ -1.37
VRK3-211ENST00000596445 KIAA0141Q14154 515 aaPredicted RBP6.51□□□□□ -1.37
VRK3-211ENST00000596445 SMCO1Q147U7 214 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 C2orf68Q2NKX9 166 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
VRK3-211ENST00000596445 CTRB2Q6GPI1 263 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
VRK3-211ENST00000596445 ZNF491Q8N8L2 437 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 OR52E5Q8NH55 327 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 ZNF431Q8TF32 576 aaPredicted RBP6.51□□□□□ -1.37
VRK3-211ENST00000596445 UBE2E2Q96LR5 201 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 MS4A10Q96PG2 267 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 PDCD10Q9BUL8 212 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 WNK1Q9H4A3 2382 aa6.51□□□□□ -1.37
VRK3-211ENST00000596445 TRBV9A0A0B4J1U6 114 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 A0A0G2JLM5 398 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 FAM223BA6NKX1 122 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 INMT-MINDY4F8WBC2 141 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 INS-IGF2F8WCM5 200 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 M0QZ24 198 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 CYB5BO43169 146 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 PRAF2O60831 178 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 PRH1P02810 166 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 TRGV3P03979 118 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 REG1AP05451 166 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 HOXB5P09067 269 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 DEFA4P12838 97 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 HIST1H1BP16401 226 aaKnown RBP6.5□□□□□ -1.37
VRK3-211ENST00000596445 TPPP2P59282 170 aa6.5□□□□□ -1.37
VRK3-211ENST00000596445 KLK9Q2XQG4 91 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms