RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CNIH1O95406 144 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 PRH1P02810 166 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 IL5P05113 134 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 ELANEP08246 267 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 VDAC1P21796 283 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 VAMP1P23763 118 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 CHRNA7P36544 502 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 RAB9AP51151 201 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 RAB25P57735 213 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 HSPE1P61604 102 aaKnown RBP8.21□□□□□ -1.1
LIG1-210ENST00000596332 C2orf68Q2NKX9 166 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 PVRIGQ6DKI7 326 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 MZT2BQ6NZ67 158 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 TEX38Q6PEX7 206 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 H2BFWTQ7Z2G1 175 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 ZNF695Q8IW36 515 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 LGI3Q8N145 548 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 FAM110DQ8TAY7 271 aaPredicted RBP8.21□□□□□ -1.1
LIG1-210ENST00000596332 TMEM68Q96MH6 324 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 ZNF257Q9Y2Q1 563 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 OR51B2Q9Y5P1 312 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 NPIPB5A8MRT5 1133 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 INS-IGF2F8WCM5 200 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 I3L521 148 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 FBXO24O75426 580 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 HLA-AP01891 365 aaKnown RBP8.2□□□□□ -1.1
LIG1-210ENST00000596332 HNRNPCP07910 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
LIG1-210ENST00000596332 TRAPPC2P0DI81 140 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 TRAPPC2BP0DI82 140 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 PSMB6P28072 239 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 ERVK-16P61578 105 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 PRCDQ00LT1 54 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 DEFA5Q01523 94 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 TMEM267Q0VDI3 215 aaPredicted RBP8.2□□□□□ -1.1
LIG1-210ENST00000596332 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
LIG1-210ENST00000596332 GGNBP1Q5YKI7 109 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 ETV3LQ6ZN32 361 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 FAM219AQ8IW50 185 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 COMMD1Q8N668 190 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 OR1L8Q8NGR8 309 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 OR5B3Q8NH48 314 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 ZNF414Q96IQ9 312 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 FYTTD1Q96QD9 318 aaKnown RBP8.2□□□□□ -1.1
LIG1-210ENST00000596332 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 GNB4Q9HAV0 340 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 COA4Q9NYJ1 87 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 CACNG5Q9UF02 275 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 PRNDQ9UKY0 176 aa8.2□□□□□ -1.1
LIG1-210ENST00000596332 CMYA5Q8N3K9 4069 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 IGLV11-55A0A075B6I3 123 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 DUXBA0A1W2PPF3 345 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 CREBL2O60519 120 aaPredicted RBP8.19□□□□□ -1.1
LIG1-210ENST00000596332 REG1AP05451 166 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
LIG1-210ENST00000596332 RPL23AP62750 156 aaKnown RBP8.19□□□□□ -1.1
LIG1-210ENST00000596332 IL15RAQ13261 267 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 RGS21Q2M5E4 152 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 SPINK9Q5DT21 86 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 OR5M8Q8NGP6 311 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 OR52E5Q8NH55 327 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 ZNF431Q8TF32 576 aaPredicted RBP8.19□□□□□ -1.1
LIG1-210ENST00000596332 OR10C1Q96KK4 312 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 MS4A10Q96PG2 267 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 SRSF8Q9BRL6 282 aaKnown RBP8.19□□□□□ -1.1
LIG1-210ENST00000596332 GON7Q9BXV9 100 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 COMMD5Q9GZQ3 224 aa8.19□□□□□ -1.1
LIG1-210ENST00000596332 A0A1B0GU03 582 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 TCRBV4S1A1TA0A5B7 111 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 INMT-MINDY4F8WBC2 141 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 H3BUA1 57 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 SNAPC5O75971 98 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 NDUFB8O95169 186 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 TSPAN15O95858 294 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 HOXB5P09067 269 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 OR13C7P0DN81 318 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 PF4V1P10720 104 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 SLC25A6P12236 298 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 ANXA3P12429 323 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 AKR1C2P52895 323 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 SLC35B1P78383 322 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 SRPXP78539 464 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 C4orf46Q504U0 113 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 CXorf66Q5JRM2 361 aaPredicted RBP8.18□□□□□ -1.1
LIG1-210ENST00000596332 OR2C3Q8N628 320 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 OR4A16Q8NH70 328 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 ENKURQ8TC29 256 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 ABHD5Q8WTS1 349 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 RRNAD1Q96FB5 475 aaKnown RBP8.18□□□□□ -1.1
LIG1-210ENST00000596332 WDR89Q96FK6 387 aaPredicted RBP8.18□□□□□ -1.1
LIG1-210ENST00000596332 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 P2RX4Q99571 388 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.18□□□□□ -1.1
LIG1-210ENST00000596332 ZFP57Q9NU63 452 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 FKBP11Q9NYL4 201 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 HSPB7Q9UBY9 170 aa8.18□□□□□ -1.1
LIG1-210ENST00000596332 TSSC4Q9Y5U2 329 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms