RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 C19orf54Q5BKX5 351 aa15.15■□□□□ 0.02
PNKP-207ENST00000596014 SLC7A5P1Q8MH63 180 aa15.15■□□□□ 0.02
PNKP-207ENST00000596014 LFNGQ8NES3 379 aa15.15■□□□□ 0.02
PNKP-207ENST00000596014 OR4X2Q8NGF9 303 aa15.15■□□□□ 0.02
PNKP-207ENST00000596014 UPK2O00526 184 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 ARPC5O15511 151 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 RPL8P62917 257 aaKnown RBP15.14■□□□□ 0.01
PNKP-207ENST00000596014 TEX38Q6PEX7 206 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 SGPP2Q8IWX5 399 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 COQ8AQ8NI60 647 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 GLYATL2Q8WU03 294 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 SEC22AQ96IW7 307 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 CITED2Q99967 270 aaPredicted RBP15.14■□□□□ 0.01
PNKP-207ENST00000596014 TMEM222Q9H0R3 208 aa15.14■□□□□ 0.01
PNKP-207ENST00000596014 IGHG4P01861 327 aa15.13■□□□□ 0.01
PNKP-207ENST00000596014 MAS1LP35410 378 aa15.13■□□□□ 0.01
PNKP-207ENST00000596014 FGL1Q08830 312 aa15.13■□□□□ 0.01
PNKP-207ENST00000596014 OPCMLQ14982 345 aa15.13■□□□□ 0.01
PNKP-207ENST00000596014 UNQ5815/PRO19632Q6UWF5 114 aa15.13■□□□□ 0.01
PNKP-207ENST00000596014 COMMD1Q8N668 190 aa15.13■□□□□ 0.01
PNKP-207ENST00000596014 SRSF12Q8WXF0 261 aaKnown RBP15.13■□□□□ 0.01
PNKP-207ENST00000596014 KCNIP3Q9Y2W7 256 aa15.13■□□□□ 0.01
PNKP-207ENST00000596014 MSGN1A6NI15 193 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 MPC2O95563 127 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 CDS2O95674 445 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 HTR2BP41595 481 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 C10orf55Q5SWW7 151 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 TEX261Q6UWH6 196 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 GALNT14Q96FL9 552 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 U3KQ87 197 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 VWFP04275 2813 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 FAM25EA8MYX2 175 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 ANKRD55Q3KP44 614 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 GSG1LQ6UXU4 331 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 PRR13Q9NZ81 148 aa15.12■□□□□ 0.01
PNKP-207ENST00000596014 WNK1Q9H4A3 2382 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 A0A1W2PN81 502 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 TCRBV4S1A1TA0A5B7 111 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 E7EUB6 86 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 SOX15O60248 233 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 IGLV1-40P01703 118 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 ELANEP08246 267 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 FGF2P09038 288 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 MYOD1P15172 320 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 CHRNA7P36544 502 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 FOXE3Q13461 319 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 ASPHD1Q5U4P2 390 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 H2BFWTQ7Z2G1 175 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 SPIN2AQ99865 258 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 SPIN2BQ9BPZ2 258 aa15.11■□□□□ 0.01
PNKP-207ENST00000596014 FOXA2Q9Y261 457 aaPredicted RBP15.11■□□□□ 0.01
PNKP-207ENST00000596014 PKD1L1Q8TDX9 2849 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 IGKV1-5P01602 117 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 OPN1MWP04001 364 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 OR9G9P0C7N8 305 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 OPN1MW2P0DN77 364 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 OPN1MW3P0DN78 364 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 PSMB8P28062 276 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 RPL27AP46776 148 aaKnown RBP15.1■□□□□ 0.01
PNKP-207ENST00000596014 TMEM187Q14656 261 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 RNF152Q8N8N0 203 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 ZNF680Q8NEM1 530 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 LHFPL5Q8TAF8 219 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 TMEM68Q96MH6 324 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 NSG2Q9Y328 171 aa15.1■□□□□ 0.01
PNKP-207ENST00000596014 C5orf51A6NDU8 294 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 ATG12O94817 140 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 APELAP0DMC3 54 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 SLC25A4P12235 298 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 S100A11P31949 105 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 CXorf66Q5JRM2 361 aaPredicted RBP15.09■□□□□ 0.01
PNKP-207ENST00000596014 C11orf87Q6NUJ2 197 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 LCNL1Q6ZST4 164 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 TMUB2Q71RG4 321 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 SELENOHQ8IZQ5 122 aaKnown RBP15.09■□□□□ 0.01
PNKP-207ENST00000596014 TMEM56Q96MV1 263 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 COMMD5Q9GZQ3 224 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 TSSC4Q9Y5U2 329 aaPredicted RBP15.09■□□□□ 0.01
PNKP-207ENST00000596014 TMEM56-RWDD3S4R434 201 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 A0A1B0GW64 132 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 ADARB2-AS1A8MUL3 147 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 RPLP1P05386 114 aaKnown RBP15.09■□□□□ 0.01
PNKP-207ENST00000596014 AKR1C2P52895 323 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 EXOSC2Q13868 293 aaKnown RBP15.09■□□□□ 0.01
PNKP-207ENST00000596014 LRRC37A5PQ49AS3 106 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 NDUFA11Q86Y39 141 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 ZNF695Q8IW36 515 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 OR5T1Q8NG75 326 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 PPP1R1CQ8WVI7 109 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 RBPMSQ93062 196 aaKnown RBP15.09■□□□□ 0.01
PNKP-207ENST00000596014 NMES1Q9C002 83 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 KLK15Q9H2R5 256 aa15.09■□□□□ 0.01
PNKP-207ENST00000596014 ADAP1O75689 374 aa15.08■□□□□ 0
PNKP-207ENST00000596014 IFNA7P01567 189 aa15.08■□□□□ 0
PNKP-207ENST00000596014 P0C879 139 aa15.08■□□□□ 0
PNKP-207ENST00000596014 PF4V1P10720 104 aa15.08■□□□□ 0
PNKP-207ENST00000596014 OR2B8PP59922 312 aa15.08■□□□□ 0
PNKP-207ENST00000596014 IZUMO4Q1ZYL8 232 aa15.08■□□□□ 0
PNKP-207ENST00000596014 NSUN5P1Q3KNT7 163 aa15.08■□□□□ 0
PNKP-207ENST00000596014 KHDC1LQ5JSQ8 128 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms