RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CORTO00230 105 aa12.76□□□□□ -0.37
PNKP-204ENST00000594661 SH2D1BO14796 132 aa12.76□□□□□ -0.37
PNKP-204ENST00000594661 CRYAAP02489 173 aa12.76□□□□□ -0.37
PNKP-204ENST00000594661 REG1AP05451 166 aa12.76□□□□□ -0.37
PNKP-204ENST00000594661 IL1F10Q8WWZ1 152 aa12.76□□□□□ -0.37
PNKP-204ENST00000594661 MEGF9Q9H1U4 602 aa12.76□□□□□ -0.37
PNKP-204ENST00000594661 CADP27708 2225 aa12.76□□□□□ -0.37
PNKP-204ENST00000594661 WNT9BO14905 357 aa12.75□□□□□ -0.37
PNKP-204ENST00000594661 TMPRSS2O15393 492 aa12.75□□□□□ -0.37
PNKP-204ENST00000594661 TOX4O94842 621 aa12.75□□□□□ -0.37
PNKP-204ENST00000594661 GABRA2P47869 451 aa12.75□□□□□ -0.37
PNKP-204ENST00000594661 BAGE3Q86Y29 109 aa12.75□□□□□ -0.37
PNKP-204ENST00000594661 BAGE2Q86Y30 109 aa12.75□□□□□ -0.37
PNKP-204ENST00000594661 DUSP13Q9UII6 198 aa12.75□□□□□ -0.37
PNKP-204ENST00000594661 TRAV9-1A0A075B6T8 112 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 TNFSF12O43508 249 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 RAMP3O60896 148 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 CDC34P49427 236 aaPredicted RBP12.74□□□□□ -0.37
PNKP-204ENST00000594661 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 NEIL1Q96FI4 390 aaPredicted RBP12.74□□□□□ -0.37
PNKP-204ENST00000594661 HES4Q9HCC6 221 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 OR2W1Q9Y3N9 320 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 TBL2Q9Y4P3 447 aaKnown RBP12.74□□□□□ -0.37
PNKP-204ENST00000594661 CEBPDP49716 269 aaPredicted RBP12.74□□□□□ -0.37
PNKP-204ENST00000594661 ZNF146Q15072 292 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 LRRC75BQ2VPJ9 315 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 WDR82Q6UXN9 313 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 ZNF295-AS1Q8N0V1 137 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 ZNF525Q8N782 197 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 OR4S2Q8NH73 311 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 ZNF596Q8TC21 504 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 SLC39A9Q9NUM3 307 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 JKAMPQ9P055 326 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
PNKP-204ENST00000594661 TRAPPC2LQ9UL33 140 aa12.74□□□□□ -0.37
PNKP-204ENST00000594661 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 F2Z2F3 143 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 TAX1BP3O14907 124 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 C1QTNF9P0C862 333 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 GLRXP35754 106 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 PRRX1P54821 245 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 RIPPLY3P57055 190 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 OR4A47Q6IF82 309 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 FAM71F2Q6NXP2 309 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 ZNF497Q6ZNH5 498 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 MOB1BQ7L9L4 216 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 OR2Z1Q8NG97 314 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 SGMS2Q8NHU3 365 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 MRPL18Q9H0U6 180 aaKnown RBP12.73□□□□□ -0.37
PNKP-204ENST00000594661 CHODLQ9H9P2 273 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 OR1A1Q9P1Q5 309 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 C16orf97H3BN30 126 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 IGHV3-13P01766 116 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 S100GP29377 79 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 RBPJQ06330 500 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 OR52L2PQ8NGH6 319 aa12.73□□□□□ -0.37
PNKP-204ENST00000594661 DPRXA6NFQ7 191 aa12.72□□□□□ -0.37
PNKP-204ENST00000594661 PGLYRP1O75594 196 aaPredicted RBP12.72□□□□□ -0.37
PNKP-204ENST00000594661 HAND1O96004 215 aa12.72□□□□□ -0.37
PNKP-204ENST00000594661 VDAC1P21796 283 aa12.72□□□□□ -0.37
PNKP-204ENST00000594661 CD40P25942 277 aa12.72□□□□□ -0.37
PNKP-204ENST00000594661 TESK1Q15569 626 aa12.72□□□□□ -0.37
PNKP-204ENST00000594661 RPP25LQ8N5L8 163 aaKnown RBP12.72□□□□□ -0.37
PNKP-204ENST00000594661 H0Y980 276 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 J3QR06 171 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 TFF1P04155 84 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 TMEM267Q0VDI3 215 aaPredicted RBP12.71□□□□□ -0.37
PNKP-204ENST00000594661 CFAP161Q6P656 301 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 UBALD1Q8TB05 177 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 WFDC12Q8WWY7 111 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 FAM103A1Q9BTL3 118 aaKnown RBP12.71□□□□□ -0.37
PNKP-204ENST00000594661 TAAR3PQ9P1P4 343 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 ADGRG4Q8IZF6 3080 aa12.71□□□□□ -0.37
PNKP-204ENST00000594661 GAGE12BA1L429 117 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 CBLN1P23435 193 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 NPPCP23582 126 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 PMCHL1Q16048 86 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 SPRNQ5BIV9 151 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 ACP7Q6ZNF0 438 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 OR10V1Q8NGI7 309 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 OR5D13Q8NGL4 314 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 RAB40CQ96S21 281 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 SMPXQ9UHP9 88 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 TIMM9Q9Y5J7 89 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 PCNX1Q96RV3 2341 aa12.71□□□□□ -0.38
PNKP-204ENST00000594661 NCOR2Q9Y618 2525 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 IGLV3-9A0A075B6K5 115 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 NPIPB11E5RHQ5 1161 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 PSPNO60542 156 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 THBDP07204 575 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 C3orf79P0CE67 100 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 F2RP25116 425 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 WFDC8Q8IUA0 241 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 OR4P4Q8NGL7 312 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 OR51H1Q8NH63 302 aa12.7□□□□□ -0.38
PNKP-204ENST00000594661 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
PNKP-204ENST00000594661 CHD8Q9HCK8 2581 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms