RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 OR2T6Q8NHC8 308 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 ASB13Q8WXK3 278 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 SRSF8Q9BRL6 282 aaKnown RBP8.56□□□□□ -1.04
USE1-204ENST00000594399 FAM103A1Q9BTL3 118 aaKnown RBP8.56□□□□□ -1.04
USE1-204ENST00000594399 NMES1Q9C002 83 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 ZNF436Q9C0F3 470 aaPredicted RBP8.56□□□□□ -1.04
USE1-204ENST00000594399 ENY2Q9NPA8 101 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 NDUFA4L2Q9NRX3 87 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 ZNF580Q9UK33 172 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 FBXO7Q9Y3I1 522 aa8.56□□□□□ -1.04
USE1-204ENST00000594399 A0A1B0GW64 132 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 MSGN1A6NI15 193 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 CEBPZOSA8MTT3 80 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 WRBO00258 174 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 MED6O75586 246 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 TSPAN9O75954 239 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 NDUFA7O95182 113 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 IGF1P05019 195 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 GIPP09681 153 aaPredicted RBP8.55□□□□□ -1.04
USE1-204ENST00000594399 EGR2P11161 476 aaPredicted RBP8.55□□□□□ -1.04
USE1-204ENST00000594399 CRIP2P52943 208 aaPredicted RBP8.55□□□□□ -1.04
USE1-204ENST00000594399 S100A10P60903 97 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 SRSF4Q08170 494 aaKnown RBP8.55□□□□□ -1.04
USE1-204ENST00000594399 ECSCRQ19T08 205 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 TMEM95Q3KNT9 176 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 CXorf66Q5JRM2 361 aaPredicted RBP8.55□□□□□ -1.04
USE1-204ENST00000594399 Q6ZSV7 163 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 HSD17B13Q7Z5P4 300 aaPredicted RBP8.55□□□□□ -1.04
USE1-204ENST00000594399 SGMS2Q8NHU3 365 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 RBKSQ9H477 322 aa8.55□□□□□ -1.04
USE1-204ENST00000594399 TRAV41A0A0B4J266 112 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 IGLC7A0M8Q6 106 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 LINC01548A6NM66 108 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 SYNGR2O43760 224 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 SSSCA1O60232 199 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 MBPP02686 304 aaPredicted RBP8.54□□□□□ -1.04
USE1-204ENST00000594399 APELAP0DMC3 54 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 BCAP31P51572 246 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 RAP2BP61225 183 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 POLR2GP62487 172 aaKnown RBP eCLIP8.54□□□□□ -1.04
USE1-204ENST00000594399 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
USE1-204ENST00000594399 CD83Q01151 205 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 ID3Q02535 119 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 TMEM267Q0VDI3 215 aaPredicted RBP8.54□□□□□ -1.04
USE1-204ENST00000594399 IL15RAQ13261 267 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 STPG2Q8N412 459 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 LFNGQ8NES3 379 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 OR10W1Q8NGF6 305 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 DTD1Q8TEA8 209 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 CHAC2Q8WUX2 184 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 PPP1R1CQ8WVI7 109 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 TMEM68Q96MH6 324 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 MAGT1Q9H0U3 335 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 C16orf95Q9H693 158 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 ZFP57Q9NU63 452 aa8.54□□□□□ -1.04
USE1-204ENST00000594399 RCL1Q9Y2P8 373 aaKnown RBP8.54□□□□□ -1.04
USE1-204ENST00000594399 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 K7EPK0 472 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 LY86O95711 162 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 PET100P0DJ07 73 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 OR13C7P0DN81 318 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 IAPPP10997 89 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 AREGP15514 252 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 WT1-ASQ06250 92 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 RAB32Q13637 225 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 KRTAP24-1Q3LI83 254 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 LRRC37A5PQ49AS3 106 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 C19orf54Q5BKX5 351 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 ASPHD1Q5U4P2 390 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 UNQ5815/PRO19632Q6UWF5 114 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 OR4F5Q8NH21 305 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 TAF15Q92804 592 aaKnown RBP eCLIP8.53□□□□□ -1.04
USE1-204ENST00000594399 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
USE1-204ENST00000594399 NOL4LQ96MY1 436 aaPredicted RBP8.53□□□□□ -1.04
USE1-204ENST00000594399 CIB3Q96Q77 187 aaPredicted RBP8.53□□□□□ -1.04
USE1-204ENST00000594399 HIPK2Q9H2X6 1198 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 LINC00527Q9UJ94 153 aa8.53□□□□□ -1.04
USE1-204ENST00000594399 LSM5Q9Y4Y9 91 aaKnown RBP8.53□□□□□ -1.04
USE1-204ENST00000594399 TET2Q6N021 2002 aaPredicted RBP8.53□□□□□ -1.04
USE1-204ENST00000594399 NPIPB5A8MRT5 1133 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 G3V318 75 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 L7N2F9 121 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 REG1AP05451 166 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 HKR1P10072 659 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 PVALBP20472 110 aaPredicted RBP8.52□□□□□ -1.05
USE1-204ENST00000594399 PSMB6P28072 239 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 VAMP2P63027 116 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 ERHP84090 104 aaKnown RBP8.52□□□□□ -1.05
USE1-204ENST00000594399 FGL1Q08830 312 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 AKIRIN2Q53H80 203 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 AKAP14Q86UN6 197 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 OR2C3Q8N628 320 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 FAM110DQ8TAY7 271 aaPredicted RBP8.52□□□□□ -1.05
USE1-204ENST00000594399 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 C19orf24Q9BVV8 132 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 GON7Q9BXV9 100 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
USE1-204ENST00000594399 SERTAD4Q9NUC0 356 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 WSB1Q9Y6I7 421 aa8.52□□□□□ -1.05
USE1-204ENST00000594399 PSMB11A5LHX3 300 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms