RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 HINT2Q9BX68 163 aa13.57□□□□□ -0.24
LIG1-206ENST00000594067 ZFHX4Q86UP3 3567 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 K7EN84 100 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 SLC17A3O00476 420 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 FOXH1O75593 365 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 CRISP2P16562 243 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 CDKN1AP38936 164 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 C17orf58Q2M2W7 97 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 STPG3Q8N7X2 389 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 ITLN1Q8WWA0 313 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 MRPL18Q9H0U6 180 aaKnown RBP13.56□□□□□ -0.24
LIG1-206ENST00000594067 IL36BQ9NZH7 164 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 CFAP47Q6ZTR5 3102 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 SAA2-SAA4A0A096LPE2 208 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 SAA2P0DJI9 122 aaPredicted RBP13.56□□□□□ -0.24
LIG1-206ENST00000594067 NPY1RP25929 384 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 GCHFRP30047 84 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 KIR2DS2P43631 304 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 EFNB3Q15768 340 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 OR4A47Q6IF82 309 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 MRPL52Q86TS9 123 aaKnown RBP13.56□□□□□ -0.24
LIG1-206ENST00000594067 HSPB9Q9BQS6 159 aa13.56□□□□□ -0.24
LIG1-206ENST00000594067 TRGV8A0A0C4DH27 118 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 A6NNC1 897 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 DLEU1O43261 78 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 CA2P00918 260 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 RPLP1P05386 114 aaKnown RBP13.55□□□□□ -0.24
LIG1-206ENST00000594067 FRMD6-AS1P0C7T7 363 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 RPL31P62899 125 aaKnown RBP13.55□□□□□ -0.24
LIG1-206ENST00000594067 KRTCAP3Q53RY4 240 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 SEM1Q6ZVN7 128 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 SLC24A4Q8NFF2 622 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 SVILO95425 2214 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 CADP27708 2225 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 TEPPQ6URK8 271 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
LIG1-206ENST00000594067 TRAV9-1A0A075B6T8 112 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 AHRRA9YTQ3 701 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 F2Z2F3 143 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 CGB3P0DN86 165 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 CGB7P0DN87 165 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 CFHR2P36980 270 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 HSPE1P61604 102 aaKnown RBP13.54□□□□□ -0.24
LIG1-206ENST00000594067 LYG1Q8N1E2 194 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 CACNA1GO43497 2377 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 IGFBP2P18065 325 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 GNG10P50151 68 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 RANP62826 216 aaKnown RBP13.54□□□□□ -0.24
LIG1-206ENST00000594067 OR5AU1Q8NGC0 362 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 OR4P4Q8NGL7 312 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 FAM122AQ96E09 287 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 PAM16Q9Y3D7 125 aa13.54□□□□□ -0.24
LIG1-206ENST00000594067 COMPP49747 757 aaPredicted RBP13.53□□□□□ -0.24
LIG1-206ENST00000594067 RAB7AP51149 207 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 LGALS4P56470 323 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 KLF3P57682 345 aaPredicted RBP13.53□□□□□ -0.24
LIG1-206ENST00000594067 RHOBP62745 196 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 C1orf174Q8IYL3 243 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 DEFB108BQ8NET1 73 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 VN1R17PQ8TDU5 208 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 IDI2-AS1Q9NZ38 188 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 ACTL6BO94805 426 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 LHBP01229 141 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 MRPS11P82912 194 aaKnown RBP13.53□□□□□ -0.24
LIG1-206ENST00000594067 DEFB109BQ30KR1 87 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 OR1L6Q8NGR2 347 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 TMEM14BQ9NUH8 114 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
LIG1-206ENST00000594067 GOLT1BQ9Y3E0 138 aa13.53□□□□□ -0.24
LIG1-206ENST00000594067 BDP1A6H8Y1 2624 aa13.52□□□□□ -0.24
LIG1-206ENST00000594067 FCN1O00602 326 aa13.52□□□□□ -0.24
LIG1-206ENST00000594067 BRS3P32247 399 aa13.52□□□□□ -0.24
LIG1-206ENST00000594067 Q0VG73 95 aa13.52□□□□□ -0.24
LIG1-206ENST00000594067 FAM216AQ8WUB2 273 aa13.52□□□□□ -0.24
LIG1-206ENST00000594067 KBTBD11-OT1A0A1B0GTJ5 212 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 NPSP0C0P6 89 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 IER3P46695 156 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 GAGE1Q13065 139 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 TMEM183BQ1AE95 376 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 BAGE3Q86Y29 109 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 BAGE2Q86Y30 109 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 LRFN3Q9BTN0 628 aa13.52□□□□□ -0.25
LIG1-206ENST00000594067 SPAARA0A1B0GVQ0 90 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
LIG1-206ENST00000594067 MIR17HGQ75NE6 70 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 MOB3BQ86TA1 216 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 RPRMLQ8N4K4 120 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 DEFB124Q8NES8 71 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 C11orf52Q96A22 123 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 EAF1Q96JC9 268 aaPredicted RBP13.51□□□□□ -0.25
LIG1-206ENST00000594067 VAMP8Q9BV40 100 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 RNF114Q9Y508 228 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 OR51B2Q9Y5P1 312 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 C9JCJ5 164 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 RAB31Q13636 194 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 FAM169BQ8N8A8 192 aa13.51□□□□□ -0.25
LIG1-206ENST00000594067 TRGV10A0A0A0MS01 117 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 SNURFLB1AK76 121 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms