RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SPATA3Q8NHX4 192 aa15.73■□□□□ 0.11
LSM4-203ENST00000593829 TAF15Q92804 592 aaKnown RBP eCLIP15.73■□□□□ 0.11
LSM4-203ENST00000593829 ISOC2Q96AB3 205 aa15.73■□□□□ 0.11
LSM4-203ENST00000593829 BSCL2Q96G97 398 aaPredicted RBP15.73■□□□□ 0.11
LSM4-203ENST00000593829 A6NDX4 124 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 ST8SIA3O43173 380 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 SCGB1D2O95969 90 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 CEACAM6P40199 344 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 LYG1Q8N1E2 194 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 FAM24BQ8N5W8 94 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 RTN4IP1Q8WWV3 396 aaPredicted RBP15.72■□□□□ 0.11
LSM4-203ENST00000593829 ST6GALNAC6Q969X2 333 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 C11orf1Q9H5F2 150 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 OR1A1Q9P1Q5 309 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 TMED3Q9Y3Q3 217 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 IGKV1-6A0A0C4DH72 117 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 A0A1W2PPI3 338 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 TIMM23O14925 209 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 OR5AC1P0C628 307 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 COMPP49747 757 aaPredicted RBP15.72■□□□□ 0.11
LSM4-203ENST00000593829 ZNF137PP52743 207 aa15.72■□□□□ 0.11
LSM4-203ENST00000593829 A0A087WWC5 75 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 NDUFA7O95182 113 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 DIRAS3O95661 229 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 CD24P25063 80 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 REG1BP48304 166 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 RELBQ01201 579 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 HERPUD1Q15011 391 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 ABCA11PQ4W5N1 156 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 TMEM219Q86XT9 240 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 OR4D5Q8NGN0 318 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 EDARADDQ8WWZ3 215 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 HIPK2Q9H2X6 1198 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 DMRT1Q9Y5R6 373 aa15.71■□□□□ 0.11
LSM4-203ENST00000593829 IGHV1-3A0A0C4DH29 117 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 WRBO00258 174 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 ITGB1BP1O14713 200 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 CHST1O43916 411 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 PRH1P02810 166 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 NQO2P16083 231 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 HOXA5P20719 270 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 IGSF11Q5DX21 431 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 DRAM1Q8N682 238 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 OR4F5Q8NH21 305 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 ABHD14BQ96IU4 210 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 CABLES2Q9BTV7 478 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 TXNL1O43396 289 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 FAM106CPP0CH98 169 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 SRPXP78539 464 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 C12orf54Q6X4T0 127 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 LYZL2Q7Z4W2 148 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 MOB3BQ86TA1 216 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 THNSL2Q86YJ6 484 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 TGIF2LXQ8IUE1 241 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 CCDC71LQ8N9Z2 235 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 OR10J5Q8NHC4 309 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 CFHR4Q92496 578 aa15.7■□□□□ 0.1
LSM4-203ENST00000593829 PARP12Q9H0J9 701 aaKnown RBP15.7■□□□□ 0.1
LSM4-203ENST00000593829 FAM90A9PA6NNJ1 464 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 ST8SIA5O15466 376 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 CDS2O95674 445 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 ZNF266Q14584 549 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 SOHLH1Q5JUK2 328 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 ODF3L1Q8IXM7 274 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 MOB3AQ96BX8 217 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 RSRP1Q9BUV0 290 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 IFI27L2Q9H2X8 130 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 SLC2A9Q9NRM0 540 aa15.69■□□□□ 0.1
LSM4-203ENST00000593829 OR2C1O95371 312 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 Q6ZSV7 163 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 CD300LFQ8TDQ1 290 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 C20orf24Q9BUV8 137 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 NPFFR1Q9GZQ6 430 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 TOLLIPQ9H0E2 274 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 SH3BGRL3Q9H299 93 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 FBXO7Q9Y3I1 522 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 PITX3O75364 302 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 FHITP49789 147 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 RAB2AP61019 212 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 EWSR1Q01844 656 aaKnown RBP eCLIP15.68■□□□□ 0.1
LSM4-203ENST00000593829 SP6Q3SY56 376 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 AGMATQ9BSE5 352 aa15.68■□□□□ 0.1
LSM4-203ENST00000593829 RCL1Q9Y2P8 373 aaKnown RBP15.68■□□□□ 0.1
LSM4-203ENST00000593829 SAA2-SAA4A0A096LPE2 208 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 A0A1B0GUS0 222 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 CXorf65A6NEN9 183 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 RAB29O14966 203 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 CTXN2P0C2S0 81 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 SAA2P0DJI9 122 aaPredicted RBP15.67■□□□□ 0.1
LSM4-203ENST00000593829 MDKP21741 143 aaPredicted RBP15.67■□□□□ 0.1
LSM4-203ENST00000593829 CDX1P47902 265 aaPredicted RBP15.67■□□□□ 0.1
LSM4-203ENST00000593829 C16orf82Q7Z2V1 217 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 OR4C13Q8NGP0 309 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 KIAA1456Q9P272 454 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 MMP24Q9Y5R2 645 aa15.67■□□□□ 0.1
LSM4-203ENST00000593829 RBFOX3A6NFN3 312 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 NHLH2Q02577 135 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 HES1Q14469 280 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 DNLZQ5SXM8 178 aa15.66■□□□□ 0.1
LSM4-203ENST00000593829 SPSB3Q6PJ21 355 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms