RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 OR10W1Q8NGF6 305 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 TMEM190Q8WZ59 177 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 SPAG8Q99932 426 aaPredicted RBP17.82■□□□□ 0.44
LSM4-202ENST00000593564 RNF167Q9H6Y7 350 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 DIABLOQ9NR28 239 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 COMMD9Q9P000 198 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 FCER2P06734 321 aa17.81■□□□□ 0.44
LSM4-202ENST00000593564 HSD17B13Q7Z5P4 300 aaPredicted RBP17.81■□□□□ 0.44
LSM4-202ENST00000593564 TMEM17Q86X19 198 aa17.81■□□□□ 0.44
LSM4-202ENST00000593564 WFDC3Q8IUB2 231 aa17.81■□□□□ 0.44
LSM4-202ENST00000593564 SLC38A6Q8IZM9 456 aa17.81■□□□□ 0.44
LSM4-202ENST00000593564 LINC00476Q8WZB0 136 aa17.8■□□□□ 0.44
LSM4-202ENST00000593564 BORCS5Q969J3 196 aa17.8■□□□□ 0.44
LSM4-202ENST00000593564 TP53TG1Q9Y2A0 90 aa17.8■□□□□ 0.44
LSM4-202ENST00000593564 LOC100506127A0A0U1RQW1 187 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 TSPAN4O14817 238 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 SERPINE2P07093 398 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 TRAPPC2P0DI81 140 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 TRAPPC2BP0DI82 140 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 OR13C7P0DN81 318 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 APOC4P55056 127 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 HERV-K104P61576 105 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 WT1-ASQ06250 92 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 Q6ZWC4 215 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 BSCL2Q96G97 398 aaPredicted RBP17.79■□□□□ 0.44
LSM4-202ENST00000593564 Q9H521 79 aa17.79■□□□□ 0.44
LSM4-202ENST00000593564 DAZ1Q9NQZ3 744 aaKnown RBP17.79■□□□□ 0.44
LSM4-202ENST00000593564 OR2T8A6NH00 312 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 TMEM127O75204 238 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 GNRHRP30968 328 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 ERVK-16P61578 105 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 SLC25A24Q6NUK1 477 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 SPSB3Q6PJ21 355 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 OR1L8Q8NGR8 309 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 ATP6V0BQ99437 205 aa17.78■□□□□ 0.44
LSM4-202ENST00000593564 TEX50A0A1B0GTY4 177 aa17.77■□□□□ 0.44
LSM4-202ENST00000593564 MARCH11A6NNE9 402 aa17.77■□□□□ 0.44
LSM4-202ENST00000593564 RPA2P15927 270 aa17.77■□□□□ 0.44
LSM4-202ENST00000593564 BMI1P35226 326 aa17.77■□□□□ 0.44
LSM4-202ENST00000593564 TNFRSF9Q07011 255 aa17.77■□□□□ 0.44
LSM4-202ENST00000593564 CADM3Q8N126 398 aa17.77■□□□□ 0.44
LSM4-202ENST00000593564 NDUFA4L2Q9NRX3 87 aa17.77■□□□□ 0.44
LSM4-202ENST00000593564 A0A0J9YWU9 116 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 MEIS3P1A6NDR6 274 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 CXorf65A6NEN9 183 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 NDUFA4O00483 81 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 UBE2CO00762 179 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 SPRY2O43597 315 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 F2RP25116 425 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 LAMTOR1Q6IAA8 161 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 DHRS11Q6UWP2 260 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 LSM10Q969L4 123 aaKnown RBP17.76■□□□□ 0.43
LSM4-202ENST00000593564 IFT46Q9NQC8 304 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 C21orf62Q9NYP8 219 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 EHFQ9NZC4 300 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 UBQLN2Q9UHD9 624 aa17.76■□□□□ 0.43
LSM4-202ENST00000593564 F11RQ9Y624 299 aaKnown RBP17.76■□□□□ 0.43
LSM4-202ENST00000593564 NUPR2A6NF83 97 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 XRCC3O43542 346 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 PGLYRP1O75594 196 aaPredicted RBP17.75■□□□□ 0.43
LSM4-202ENST00000593564 RLN1P04808 185 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 MFAP2P55001 183 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 PMS2P11Q13670 270 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 ODF3L2Q3SX64 289 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 LYG2Q86SG7 212 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 MOB3AQ96BX8 217 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 ANAPC10Q9UM13 185 aa17.75■□□□□ 0.43
LSM4-202ENST00000593564 KIR2DL5BA0A0G2JN68 375 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 KIR2DL5BA0A0G2JPC4 375 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 EWSR1Q01844 656 aaKnown RBP eCLIP17.74■□□□□ 0.43
LSM4-202ENST00000593564 DEFB135Q30KP9 77 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 KIR2DL5AQ8N109 375 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 KIR2DL5BQ8NHK3 375 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 SCARB1Q8WTV0 552 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 FCAMRQ8WWV6 532 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 ZNF2Q9BSG1 426 aaPredicted RBP17.74■□□□□ 0.43
LSM4-202ENST00000593564 CHRDL1Q9BU40 450 aa17.74■□□□□ 0.43
LSM4-202ENST00000593564 F8W735 103 aaPredicted RBP17.73■□□□□ 0.43
LSM4-202ENST00000593564 K7EMT4 169 aa17.73■□□□□ 0.43
LSM4-202ENST00000593564 ATP6V1G2O95670 118 aa17.73■□□□□ 0.43
LSM4-202ENST00000593564 ATF4P18848 351 aaPredicted RBP17.73■□□□□ 0.43
LSM4-202ENST00000593564 RFX2P48378 723 aa17.73■□□□□ 0.43
LSM4-202ENST00000593564 DGCR14Q96DF8 476 aaKnown RBP17.73■□□□□ 0.43
LSM4-202ENST00000593564 HINT2Q9BX68 163 aa17.73■□□□□ 0.43
LSM4-202ENST00000593564 OR51B2Q9Y5P1 312 aa17.73■□□□□ 0.43
LSM4-202ENST00000593564 IGHV3-21A0A0B4J1V1 117 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 OR4C46A6NHA9 309 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 K7EIM0 57 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 LY6G6CO95867 125 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 KRASP01116 189 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 ADMP35318 185 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 LPAR6P43657 344 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 S100A16Q96FQ6 103 aaKnown RBP17.72■□□□□ 0.43
LSM4-202ENST00000593564 C20orf24Q9BUV8 137 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 NSG2Q9Y328 171 aa17.72■□□□□ 0.43
LSM4-202ENST00000593564 C15orf62A8K5M9 175 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 SNAPC5O75971 98 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 G6PCP35575 357 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 NEDD8Q15843 81 aa17.71■□□□□ 0.43
LSM4-202ENST00000593564 CEMP1Q6PRD7 247 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms