RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CLEC2LP0C7M8 214 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 PSMB9P28065 219 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 MFAP2P55001 183 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 GABARAPL2P60520 117 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 RPP25LQ8N5L8 163 aaKnown RBP12.1□□□□□ -0.47
LIG1-205ENST00000593425 DMBX1Q8NFW5 382 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 OR51H1Q8NH63 302 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 VN1R17PQ8TDU5 208 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 RNF183Q96D59 192 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 CHRDL1Q9BU40 450 aa12.1□□□□□ -0.47
LIG1-205ENST00000593425 QTRT1Q9BXR0 403 aaKnown RBP12.1□□□□□ -0.47
LIG1-205ENST00000593425 DAZ1Q9NQZ3 744 aaKnown RBP12.1□□□□□ -0.47
LIG1-205ENST00000593425 F8W735 103 aaPredicted RBP12.09□□□□□ -0.47
LIG1-205ENST00000593425 UBE2CO00762 179 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 OR13C7P0DN81 318 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 RPL35AP18077 110 aaKnown RBP12.09□□□□□ -0.47
LIG1-205ENST00000593425 HSPA13P48723 471 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 MXD1Q05195 221 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 TMEM17Q86X19 198 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 SPARTQ8N0X7 666 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 RNF167Q9H6Y7 350 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 PLEKHA2Q9HB19 425 aa12.09□□□□□ -0.47
LIG1-205ENST00000593425 KIR2DL5BA0A0G2JN68 375 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 KIR2DL5BA0A0G2JPC4 375 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 TEX50A0A1B0GTY4 177 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 ZNF207O43670 478 aaKnown RBP12.08□□□□□ -0.48
LIG1-205ENST00000593425 SERPINE2P07093 398 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 FGF2P09038 288 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 TRAPPC2P0DI81 140 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 TRAPPC2BP0DI82 140 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.48
LIG1-205ENST00000593425 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.48
LIG1-205ENST00000593425 SDC2P34741 201 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 ADMP35318 185 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 AADACL3Q5VUY0 350 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 THOC7Q6I9Y2 204 aaKnown RBP12.08□□□□□ -0.48
LIG1-205ENST00000593425 LAMTOR1Q6IAA8 161 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 SLC25A24Q6NUK1 477 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 KIR2DL5AQ8N109 375 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 STPG3Q8N7X2 389 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 KIR2DL5BQ8NHK3 375 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
LIG1-205ENST00000593425 ZNF414Q96IQ9 312 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 C20orf24Q9BUV8 137 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 VCX3BQ9H321 246 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 SSR3Q9UNL2 185 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 ETV7Q9Y603 341 aa12.08□□□□□ -0.48
LIG1-205ENST00000593425 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 NDUFA4O00483 81 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 MRPS14O60783 128 aaKnown RBP12.07□□□□□ -0.48
LIG1-205ENST00000593425 DEDDO75618 318 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 CTSDP07339 412 aaPredicted RBP12.07□□□□□ -0.48
LIG1-205ENST00000593425 OR5B3Q8NH48 314 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 SCARB1Q8WTV0 552 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 GIMAP1Q8WWP7 306 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 AUNIPQ9H7T9 357 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 MAP6D1Q9H9H5 199 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 NDUFA4L2Q9NRX3 87 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 C21orf62Q9NYP8 219 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 COMMD9Q9P000 198 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 KLK5Q9Y337 293 aaPredicted RBP12.07□□□□□ -0.48
LIG1-205ENST00000593425 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
LIG1-205ENST00000593425 HERC2O95714 4834 aa12.07□□□□□ -0.48
LIG1-205ENST00000593425 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 OR4C46A6NHA9 309 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 MARCH11A6NNE9 402 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 CYB5BO43169 146 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 GNRHRP30968 328 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 SCAND1P57086 179 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 ZNF124Q15973 351 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 IDNKQ5T6J7 187 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 HSD17B13Q7Z5P4 300 aaPredicted RBP12.06□□□□□ -0.48
LIG1-205ENST00000593425 APRG1Q8IVJ8 170 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 UBAC2Q8NBM4 344 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 OR5AP2Q8NGF4 316 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 OR1L8Q8NGR8 309 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 PHLDA1Q8WV24 401 aaPredicted RBP12.06□□□□□ -0.48
LIG1-205ENST00000593425 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 HINT2Q9BX68 163 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 RAB26Q9ULW5 256 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 NSG2Q9Y328 171 aa12.06□□□□□ -0.48
LIG1-205ENST00000593425 A0A0A6YYH2 397 aa12.05□□□□□ -0.48
LIG1-205ENST00000593425 A6NJ64 397 aa12.05□□□□□ -0.48
LIG1-205ENST00000593425 K7EIM0 57 aa12.05□□□□□ -0.48
LIG1-205ENST00000593425 K7EMT4 169 aa12.05□□□□□ -0.48
LIG1-205ENST00000593425 RLN1P04808 185 aa12.05□□□□□ -0.48
LIG1-205ENST00000593425 ERVK-16P61578 105 aa12.05□□□□□ -0.48
LIG1-205ENST00000593425 SPSB3Q6PJ21 355 aa12.05□□□□□ -0.48
LIG1-205ENST00000593425 LSM10Q969L4 123 aaKnown RBP12.05□□□□□ -0.48
LIG1-205ENST00000593425 HERV-K104P61576 105 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 Q56UQ5 140 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 TMEM217Q8N7C4 229 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 FCAMRQ8WWV6 532 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 FCGR1BQ92637 280 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 ATP6V0BQ99437 205 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 RNF2Q99496 336 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 EHFQ9NZC4 300 aa12.04□□□□□ -0.48
LIG1-205ENST00000593425 SMPXQ9UHP9 88 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms