RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 DNM1P46Q6ZS02 220 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 FAM71E2Q8N5Q1 922 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 ZFP41Q8N8Y5 198 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 SLC30A7Q8NEW0 376 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 APOBEC3DQ96AK3 386 aaPredicted RBP3.44□□□□□ -1.86
SMAD4-216ENST00000593223 ROPN1LQ96C74 230 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 MALSU1Q96EH3 234 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF414Q96IQ9 312 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 CYYR1Q96J86 154 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 PPP3R2Q96LZ3 170 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 LINC00477Q96M19 166 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 CCDC115Q96NT0 180 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 OR7D2Q96RA2 312 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 DOHHQ9BU89 302 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 C1orf50Q9BV19 199 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 PRTFDC1Q9NRG1 225 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 HSPB8Q9UJY1 196 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 GNG8Q9UK08 70 aa3.44□□□□□ -1.86
SMAD4-216ENST00000593223 MYO16Q9Y6X6 1858 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 KMT2CQ8NEZ4 4911 aaKnown RBP3.43□□□□□ -1.86
SMAD4-216ENST00000593223 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 IGHV3OR16-13A0A075B7E8 117 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 IGKV1D-13A0A0B4J2D9 117 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 A0A1B0GXF2 115 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 GMNCA6NCL1 334 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 NKX2-6A6NCS4 301 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 ZFP92A6NM28 416 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 FAM220BPB1ANY3 271 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 K7EQS6 105 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 PIAS1O75925 651 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 NDUFC2O95298 119 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 EPPINO95925 133 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 FAM107AO95990 144 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 SERPINE1P05121 402 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 ATP5G1P05496 136 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 EIF4EP06730 217 aaKnown RBP3.43□□□□□ -1.86
SMAD4-216ENST00000593223 IGKV1-13P0DP09 117 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 KLK7P49862 253 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 SLC18A1P54219 525 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 NCALDP61601 193 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 GNG5P63218 68 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 HPCAP84074 193 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 RELAQ04206 551 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 INCA1Q0VD86 236 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 PRDX4Q13162 271 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 BIKQ13323 160 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 C16orf72Q14CZ0 275 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 TAF9Q16594 264 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 OR2B11Q5JQS5 317 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 TSPO2Q5TGU0 170 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 UNQ9370/PRO34162Q6UXP9 181 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 CLEC19AQ6UXS0 136 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 C9orf40Q8IXQ3 194 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 OR2A12Q8NGT7 310 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 OR10J6PQ8NGY7 276 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 OR10G6Q8NH81 332 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 MBD3L1Q8WWY6 194 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 CHCHD10Q8WYQ3 142 aaPredicted RBP3.43□□□□□ -1.86
SMAD4-216ENST00000593223 NARS2Q96I59 477 aaKnown RBP3.43□□□□□ -1.86
SMAD4-216ENST00000593223 LXNQ9BS40 222 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 YIPF3Q9GZM5 350 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 SLIRPQ9GZT3 109 aaKnown RBP3.43□□□□□ -1.86
SMAD4-216ENST00000593223 SLCO1B3Q9NPD5 702 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 C14orf105Q9NVL8 296 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 PCYOX1Q9UHG3 505 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 HDGFL3Q9Y3E1 203 aa3.43□□□□□ -1.86
SMAD4-216ENST00000593223 PDCD11Q14690 1871 aaKnown RBP3.42□□□□□ -1.86
SMAD4-216ENST00000593223 A0A1B0GVG6 124 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 SIGLEC16A6NMB1 481 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 H7C417 338 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 J3KT08 172 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 TP53I11O14683 189 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 MRASO14807 208 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 AGPAT2O15120 278 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 NDUFS5O43920 106 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 IGF2P01344 180 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 HBZP02008 142 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 LGALS1P09382 135 aaKnown RBP3.42□□□□□ -1.86
SMAD4-216ENST00000593223 OR8U8P0C7N1 319 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 ORM2P19652 201 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 RAB3BP20337 219 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 GGT2P36268 569 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 EMP1P54849 157 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 RPS24P62847 133 aaKnown RBP3.42□□□□□ -1.86
SMAD4-216ENST00000593223 ATP6AP1LQ52LC2 224 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 HES3Q5TGS1 186 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 SPATA31B1PQ5VZV4 182 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 UFSP1Q6NVU6 142 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 IGFL2Q6UWQ7 119 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 MOB1BQ7L9L4 216 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 C17orf82Q86X59 251 aaPredicted RBP3.42□□□□□ -1.86
SMAD4-216ENST00000593223 KRTAP11-1Q8IUC1 163 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 DEFB125Q8N687 156 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF615Q8N8J6 731 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 OR4M1Q8NGD0 313 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 OR1N2Q8NGR9 330 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 OR5K1Q8NHB7 308 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 GPR119Q8TDV5 335 aa3.42□□□□□ -1.86
SMAD4-216ENST00000593223 CT55Q8WUE5 264 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms