RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TRGV3P03979 118 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 TCRBP04435 133 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 TRAPPC2P0DI81 140 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 TRAPPC2BP0DI82 140 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 AREGP15514 252 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 IFITM3Q01628 133 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 TTC9CQ8N5M4 171 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 SLC35G3Q8N808 338 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 ZNF491Q8N8L2 437 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 UBE2E2Q96LR5 201 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
DDX39A-221ENST00000593026 C20orf85Q9H1P6 137 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 ZNF257Q9Y2Q1 563 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 A0A0B4J2A0 478 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 FAM240BA0A1B0GVZ2 78 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 IGLC7A0M8Q6 106 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 BRI3O95415 125 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 HLA-AP01891 365 aaKnown RBP11.62□□□□□ -0.55
DDX39A-221ENST00000593026 C18orf65Q6ZTR6 163 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 C8orf86Q6ZUL3 223 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 HSD17B13Q7Z5P4 300 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-221ENST00000593026 ZNF429Q86V71 674 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 C4orf3Q8WVX3 66 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
DDX39A-221ENST00000593026 NDUFA4L2Q9NRX3 87 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 NUDT15Q9NV35 164 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 SHPKQ9UHJ6 478 aa11.62□□□□□ -0.55
DDX39A-221ENST00000593026 A0A0B4J293 547 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 DHFRP00374 187 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 REG1AP05451 166 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 OR4E1P0C645 316 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 ANXA7P20073 488 aaKnown RBP11.61□□□□□ -0.55
DDX39A-221ENST00000593026 PSMB6P28072 239 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 RAB25P57735 213 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 KIAA0141Q14154 515 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-221ENST00000593026 ANKRD55Q3KP44 614 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 C4orf46Q504U0 113 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 OR10W1Q8NGF6 305 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 OR5B12Q96R08 314 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 PDCD10Q9BUL8 212 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 GNB4Q9HAV0 340 aa11.61□□□□□ -0.55
DDX39A-221ENST00000593026 TRAV6A0A075B6T7 132 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 A0A0G2JLM5 398 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 C9orf170A2RU37 121 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 PF4P02776 101 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 PRH1P02810 166 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 CRYGCP07315 174 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 OR13C7P0DN81 318 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 CTRB1P17538 263 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 MECP2P51608 486 aaKnown RBP11.6□□□□□ -0.55
DDX39A-221ENST00000593026 DEFA1P59665 94 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 DEFA3P59666 94 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 HSPE1P61604 102 aaKnown RBP11.6□□□□□ -0.55
DDX39A-221ENST00000593026 DEFA5Q01523 94 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 CTRB2Q6GPI1 263 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 TREML4Q6UXN2 200 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 Q6ZRM9 215 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 C19orf35Q6ZS72 473 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 LYG2Q86SG7 212 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 MRPL41Q8IXM3 137 aaKnown RBP11.6□□□□□ -0.55
DDX39A-221ENST00000593026 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 ENKURQ8TC29 256 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 GPR146Q96CH1 333 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
DDX39A-221ENST00000593026 TRBV9A0A0B4J1U6 114 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 C13orf42A0A1B0GVH6 325 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 FAM223BA6NKX1 122 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 ST8SIA3O43173 380 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 IFNA17P01571 189 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 IGHV3-11P01762 117 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 DEFA4P12838 97 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 RHOGP84095 191 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 PRCDQ00LT1 54 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 WT1-ASQ06250 92 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 DHRS2Q13268 280 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 DEFB136Q30KP8 78 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 NMSQ5H8A3 153 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 FAM223AQ8IWN6 122 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 ALX4Q9H161 411 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-221ENST00000593026 PLEKHA3Q9HB20 300 aa11.59□□□□□ -0.55
DDX39A-221ENST00000593026 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-221ENST00000593026 I3L521 148 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 DUS4LO95620 317 aaKnown RBP11.58□□□□□ -0.56
DDX39A-221ENST00000593026 LGALS1P09382 135 aaKnown RBP11.58□□□□□ -0.56
DDX39A-221ENST00000593026 H2AFB2P0C5Z0 115 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 SULT1A3P0DMM9 295 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 SULT1A4P0DMN0 295 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 HIST1H1BP16401 226 aaKnown RBP11.58□□□□□ -0.56
DDX39A-221ENST00000593026 RUNX1Q01196 453 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 SPINK9Q5DT21 86 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 ETV3LQ6ZN32 361 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 NECAP1Q8NC96 275 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 COQ8AQ8NI60 647 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 RAX2Q96IS3 184 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 USMG5Q96IX5 58 aa11.58□□□□□ -0.56
DDX39A-221ENST00000593026 DUX3Q96PT4 197 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms