RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TRAV6A0A075B6T7 132 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 IGHV7-81A0A0B4J1V7 117 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 A0A1W2PN81 502 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 HMX3A6NHT5 357 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 RAB29O14966 203 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 HSPB1P04792 205 aaKnown RBP7.29□□□□□ -1.24
BRCA1-226ENST00000591534 LGALS1P09382 135 aaKnown RBP7.29□□□□□ -1.24
BRCA1-226ENST00000591534 SCTP09683 121 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 OR4E1P0C645 316 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 SPNP16150 400 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 BTCP35070 178 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 CHRNA7P36544 502 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 BCAP31P51572 246 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 KIAA0141Q14154 515 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-226ENST00000591534 ECSCRQ19T08 205 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 ACSM6Q6P461 480 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 LYG2Q86SG7 212 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 AKAP14Q86UN6 197 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 ZNF645Q8N7E2 425 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 DLX4Q92988 240 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-226ENST00000591534 IL22RA2Q969J5 263 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 RNF5Q99942 180 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 NABP2Q9BQ15 211 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 HDHD3Q9BSH5 251 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-226ENST00000591534 SLA2Q9H6Q3 261 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 RDH8Q9NYR8 311 aa7.29□□□□□ -1.24
BRCA1-226ENST00000591534 OR5H14A6NHG9 310 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 NDUFA3O95167 84 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 SERPINE2P07093 398 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 PPP1CCP36873 323 aaKnown RBP7.28□□□□□ -1.24
BRCA1-226ENST00000591534 CRIP2P52943 208 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-226ENST00000591534 PIGPP57054 158 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 RRAS2P62070 204 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-226ENST00000591534 GNMTQ14749 295 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 ZNF124Q15973 351 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 AKIRIN2Q53H80 203 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 AADACL3Q5VUY0 350 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 ZNF833PQ6ZTB9 187 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 FAM219AQ8IW50 185 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 LGI3Q8N145 548 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 OR52L2PQ8NGH6 319 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 OR4D10Q8NGI6 311 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 OR13C8Q8NGS7 320 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 SVIPQ8NHG7 77 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 MARCH1Q8TCQ1 289 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 MRPL20Q9BYC9 149 aaKnown RBP7.28□□□□□ -1.24
BRCA1-226ENST00000591534 SLC2A9Q9NRM0 540 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 ELF5Q9UKW6 265 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-226ENST00000591534 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
BRCA1-226ENST00000591534 A0A0G2JLM5 398 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 LCE6AA0A183 80 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 CRYM-AS1A6NIL9 109 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 H0Y980 276 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 H7C2Y5 167 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 RRHO14718 337 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 MPPED1O15442 326 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 SCAF4O95104 1147 aaKnown RBP7.27□□□□□ -1.25
BRCA1-226ENST00000591534 SFT2D2O95562 160 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 AKR1C4P17516 323 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 ZP3P21754 424 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 AADACP22760 399 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 NFYAP23511 347 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-226ENST00000591534 SLURP1P55000 103 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 FXYD4P59646 89 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 CX3CL1P78423 397 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 DHRS2Q13268 280 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 IGSF11Q5DX21 431 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 ASPHD1Q5U4P2 390 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 PPP1R27Q86WC6 154 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 C12orf45Q8N5I9 185 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-226ENST00000591534 MITD1Q8WV92 249 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 SECTM1Q8WVN6 248 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 ARPC1AQ92747 370 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 GPHA2Q96T91 129 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 NAA60Q9H7X0 242 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 RANGRFQ9HD47 186 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-226ENST00000591534 COMMD9Q9P000 198 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 TMED3Q9Y3Q3 217 aa7.27□□□□□ -1.25
BRCA1-226ENST00000591534 SAA2-SAA4A0A096LPE2 208 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 C3orf85A0A1B0GTC6 90 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 C13orf42A0A1B0GVH6 325 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 C9orf170A2RU37 121 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 A8MZ25 164 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 H3BUA1 57 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 RBFOX2O43251 390 aaKnown RBP eCLIP7.26□□□□□ -1.25
BRCA1-226ENST00000591534 CCNKO75909 580 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 SAA2P0DJI9 122 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-226ENST00000591534 HLA-GP17693 338 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 CNTFRP26992 372 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 TPPP2P59282 170 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 RAP2BP61225 183 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 ERVK-16P61578 105 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 RTL8BQ17RB0 113 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 THOC7Q6I9Y2 204 aaKnown RBP7.26□□□□□ -1.25
BRCA1-226ENST00000591534 FAAP20Q6NZ36 180 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 UNQ5815/PRO19632Q6UWF5 114 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 GSG1LQ6UXU4 331 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 ZNF562Q6V9R5 426 aa7.26□□□□□ -1.25
BRCA1-226ENST00000591534 ODF3L1Q8IXM7 274 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms