RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 OR51B2Q9Y5P1 312 aa16.71■□□□□ 0.27
R3HDM4-206ENST00000590454 PF4V1P10720 104 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 RAB25P57735 213 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 KIAA0141Q14154 515 aaPredicted RBP16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 RNF152Q8N8N0 203 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 OR4F17Q8NGA8 305 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 OR52B4Q8NGK2 314 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 MS4A10Q96PG2 267 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 OR4F4Q96R69 305 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 SPIN2AQ99865 258 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 SPIN2BQ9BPZ2 258 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 COMMD5Q9GZQ3 224 aa16.7■□□□□ 0.26
R3HDM4-206ENST00000590454 HLA-AP01891 365 aaKnown RBP16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 PRH1P02810 166 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 REG1AP05451 166 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 ELANEP08246 267 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 FGF2P09038 288 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 H2AFB2P0C5Z0 115 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 ANXA3P12429 323 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 UBE2MP61081 183 aaKnown RBP16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 DEFA5Q01523 94 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 DHRS2Q13268 280 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 KHDC1LQ5JSQ8 128 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 LGI3Q8N145 548 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 COMMD1Q8N668 190 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 OR4A16Q8NH70 328 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 RNASE11Q8TAA1 199 aaKnown RBP16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 IL22RA2Q969J5 263 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 RRNAD1Q96FB5 475 aaKnown RBP16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 PRNDQ9UKY0 176 aa16.69■□□□□ 0.26
R3HDM4-206ENST00000590454 IGLC7A0M8Q6 106 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 RBMXL2O75526 392 aaKnown RBP16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 ATG12O94817 140 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 SPNP16150 400 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 CXorf66Q5JRM2 361 aaPredicted RBP16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 C11orf87Q6NUJ2 197 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 LYG2Q86SG7 212 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 NDUFA11Q86Y39 141 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 OR1L8Q8NGR8 309 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 ENKURQ8TC29 256 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 HINT2Q9BX68 163 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 NDUFA4L2Q9NRX3 87 aa16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 TSSC4Q9Y5U2 329 aaPredicted RBP16.68■□□□□ 0.26
R3HDM4-206ENST00000590454 A0A0B4J2A0 478 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 TRAPPC2P0DI81 140 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 TRAPPC2BP0DI82 140 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 RAB9AP51151 201 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 RPL23AP62750 156 aaKnown RBP16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 C4orf46Q504U0 113 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 NMSQ5H8A3 153 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 TTC9CQ8N5M4 171 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 OR5M8Q8NGP6 311 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 MYOZ3Q8TDC0 251 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 LSM10Q969L4 123 aaKnown RBP16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 SEC22CQ9BRL7 303 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 ZNF355PQ9NSJ1 428 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 COA4Q9NYJ1 87 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 CACNG5Q9UF02 275 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 SHPKQ9UHJ6 478 aa16.67■□□□□ 0.26
R3HDM4-206ENST00000590454 ST8SIA3O43173 380 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 DEFA1P59665 94 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 DEFA3P59666 94 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 WT1-ASQ06250 92 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 TMEM65Q6PI78 240 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 LRTM2Q8N967 370 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 DUSP18Q8NEJ0 188 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 TMEM68Q96MH6 324 aa16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 ALX4Q9H161 411 aaPredicted RBP16.66■□□□□ 0.26
R3HDM4-206ENST00000590454 PSMB6P28072 239 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 MECP2P51608 486 aaKnown RBP16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 SRPXP78539 464 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 ZNF429Q86V71 674 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 FAM219AQ8IW50 185 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 ZNF491Q8N8L2 437 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 OR5B3Q8NH48 314 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 GNB4Q9HAV0 340 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 FKBP11Q9NYL4 201 aa16.65■□□□□ 0.26
R3HDM4-206ENST00000590454 NPIPB5A8MRT5 1133 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 K7EIL1 84 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 NXPH3O95157 252 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 TRGV3P03979 118 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 HOXB5P09067 269 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 CTRB1P17538 263 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 TPPP2P59282 170 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 HSPE1P61604 102 aaKnown RBP16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 CTRB2Q6GPI1 263 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 WWC2-AS2Q96NR7 200 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 ZNF257Q9Y2Q1 563 aa16.64■□□□□ 0.25
R3HDM4-206ENST00000590454 NOTCH3Q9UM47 2321 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 ADAP1O75689 374 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 DUS4LO95620 317 aaKnown RBP16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 CRYGCP07315 174 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 OR13C7P0DN81 318 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 CD33P20138 364 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 PRCDQ00LT1 54 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 DEFB121Q5J5C9 76 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 C8orf86Q6ZUL3 223 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 KLHL30-AS1Q8NEE0 82 aa16.63■□□□□ 0.25
R3HDM4-206ENST00000590454 WFDC9Q8NEX5 89 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms