RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 MT-CO3P00414 261 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 CSN3P07498 182 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 CRYGSP22914 178 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
CIRBP-228ENST00000590347 LSM10Q969L4 123 aaKnown RBP12.62□□□□□ -0.39
CIRBP-228ENST00000590347 TTC28Q96AY4 2481 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 HELTA6NFD8 242 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 SYNGR3O43761 229 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 RHBDL1O75783 438 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 AMY1AP04745 511 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 LINC00869P0C866 280 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 CEBPDP49716 269 aaPredicted RBP12.61□□□□□ -0.39
CIRBP-228ENST00000590347 PLP1P60201 277 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 RHBDD2Q6NTF9 364 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 TEX45Q8NA69 505 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 TMEM70Q9BUB7 260 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 PEF1Q9UBV8 284 aaKnown RBP12.61□□□□□ -0.39
CIRBP-228ENST00000590347 IGHV3-43A0A0B4J1X8 118 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 C5orf49A4QMS7 147 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 TNFSF11O14788 317 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 IGHV3-43DP0DP04 118 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 GCHFRP30047 84 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 ABHD12Q8N2K0 398 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 MTURNQ8N3F0 131 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 NINJ1Q92982 152 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 SIT1Q9Y3P8 196 aa12.61□□□□□ -0.39
CIRBP-228ENST00000590347 TNRC6AQ8NDV7 1962 aaKnown RBP12.61□□□□□ -0.39
CIRBP-228ENST00000590347 TRAV24A0A0B4J272 114 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 LRRC30A6NM36 301 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 K7EMI3 77 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 MT-CO2P00403 227 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 ZNF137PP52743 207 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 MS4A5Q9H3V2 200 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 COL4A2P08572 1712 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 CFAP47Q6ZTR5 3102 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 TRAV26-1A0A087WT03 109 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 PTGDSP41222 190 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 GUSBP11Q6P575 273 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 ACP7Q6ZNF0 438 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 OR4S2Q8NH73 311 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 FAM216AQ8WUB2 273 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 HES4Q9HCC6 221 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 RHOBP62745 196 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 PSG5Q15238 335 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 IBA57Q5T440 356 aaKnown RBP12.6□□□□□ -0.39
CIRBP-228ENST00000590347 ZNF788Q6ZQV5 615 aa12.6□□□□□ -0.39
CIRBP-228ENST00000590347 AKIRIN1Q9H9L7 192 aaPredicted RBP12.6□□□□□ -0.39
CIRBP-228ENST00000590347 LIN7CQ9NUP9 197 aaKnown RBP12.6□□□□□ -0.39
CIRBP-228ENST00000590347 PPIAL4CA0A0B4J2A2 164 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 LILRA5A6NI73 299 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 PATE3B3GLJ2 98 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 CER1O95813 267 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 CFIP05156 583 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 TBR1Q16650 682 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 WDR73Q6P4I2 378 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 FOXL2NBQ6ZUU3 175 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 MIR17HGQ75NE6 70 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 MGST2Q99735 147 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 SAA2-SAA4A0A096LPE2 208 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 TEX48A0A1B0GUV7 120 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 BLACEA4D250 179 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 C15orf62A8K5M9 175 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 CELA2AP08217 269 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 MKXQ8IYA7 352 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 SPEM1Q8N4L4 309 aa12.59□□□□□ -0.39
CIRBP-228ENST00000590347 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.39
CIRBP-228ENST00000590347 DUX1O43812 170 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 ZNF718Q3SXZ3 478 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 PRSS57Q6UWY2 283 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 C12orf54Q6X4T0 127 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 TPRX1Q8N7U7 411 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 MAFAQ8NHW3 353 aaPredicted RBP12.58□□□□□ -0.4
CIRBP-228ENST00000590347 STAG3L2P0CL84 134 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 STAG3L3P0CL85 134 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 GPR183P32249 361 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 RAB9AP51151 201 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 FGF12P61328 243 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 TMEM42Q69YG0 159 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 UBALD2Q8IYN6 164 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 RFESDQ8TAC1 157 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
CIRBP-228ENST00000590347 HLA-DQA1P01909 254 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 HTR1DP28221 377 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 CEACAM16Q2WEN9 425 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 TIGITQ495A1 244 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 H2BFWTQ7Z2G1 175 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 TMEM251Q8N6I4 163 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 URB1-AS1Q96HZ7 61 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-228ENST00000590347 ICE1Q9Y2F5 2266 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 CD5LO43866 347 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 CXorf1O96002 111 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 NGFP01138 241 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 SPATA46Q5T0L3 261 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 PLXDC1Q8IUK5 500 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 SCCPDHQ8NBX0 429 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 HINT2Q9BX68 163 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 HEYLQ9NQ87 328 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-228ENST00000590347 DLL3Q9NYJ7 618 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms