RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LHFPL1Q86WI0 220 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 OR4D10Q8NGI6 311 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 OR4A16Q8NH70 328 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 TERB2Q8NHR7 220 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 MCFD2Q8NI22 146 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 ZFAND1Q8TCF1 268 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 ASCL2Q99929 193 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
TPM4-212ENST00000590180 FAM212BQ9NTI7 297 aaPredicted RBP9.23□□□□□ -0.93
TPM4-212ENST00000590180 FKBP11Q9NYL4 201 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 THYN1Q9P016 225 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 COPZ2Q9P299 210 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 RABL2AQ9UBK7 228 aaPredicted RBP9.23□□□□□ -0.93
TPM4-212ENST00000590180 PEMTQ9UBM1 199 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 PRNDQ9UKY0 176 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 RABL2BQ9UNT1 228 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 SMAD5-AS1Q9Y6J3 95 aa9.23□□□□□ -0.93
TPM4-212ENST00000590180 IGLV11-55A0A075B6I3 123 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 DISC1C4P0D8 188 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 IGLV1-51P01701 117 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 HLA-AP01891 365 aaKnown RBP9.22□□□□□ -0.93
TPM4-212ENST00000590180 CD74P04233 296 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 CLEC3BP05452 202 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 CSN3P07498 182 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 FGF2P09038 288 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 ARL3P36405 182 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 MEF2DQ14814 521 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 THOC7Q6I9Y2 204 aaKnown RBP9.22□□□□□ -0.93
TPM4-212ENST00000590180 IL34Q6ZMJ4 242 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 HSD17B13Q7Z5P4 300 aaPredicted RBP9.22□□□□□ -0.93
TPM4-212ENST00000590180 MARCH1Q8TCQ1 289 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 ZNF486Q96H40 463 aaPredicted RBP9.22□□□□□ -0.93
TPM4-212ENST00000590180 CXorf58Q96LI9 332 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 TSC22D3Q99576 134 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 NDUFA4L2Q9NRX3 87 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 CEPT1Q9Y6K0 416 aa9.22□□□□□ -0.93
TPM4-212ENST00000590180 ZNF320A2RRD8 509 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 FABP12A6NFH5 140 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 H0Y980 276 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 PTBP1P26599 531 aaKnown RBP eCLIP9.21□□□□□ -0.94
TPM4-212ENST00000590180 TNFSF8P32971 234 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 RND3P61587 244 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 WT1-ASQ06250 92 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 FAM106AQ4KMX7 169 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 C11orf87Q6NUJ2 197 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 FAAP20Q6NZ36 180 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 CADM3Q8N126 398 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 CCDC71LQ8N9Z2 235 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 SMIM4Q8WVI0 70 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 LSM10Q969L4 123 aaKnown RBP9.21□□□□□ -0.94
TPM4-212ENST00000590180 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 SEC22AQ96IW7 307 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 TMEM56Q96MV1 263 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 SLIRPQ9GZT3 109 aaKnown RBP9.21□□□□□ -0.94
TPM4-212ENST00000590180 ZC4H2Q9NQZ6 224 aa9.21□□□□□ -0.94
TPM4-212ENST00000590180 RSL24D1Q9UHA3 163 aaKnown RBP9.21□□□□□ -0.94
TPM4-212ENST00000590180 TRBV7-1A0A0A6YYK4 115 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 C3orf85A0A1B0GTC6 90 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 MFSD2BA6NFX1 497 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 CTDSPLO15194 276 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 IGKV1-39P01597 117 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 IGKV1D-39P04432 117 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 NHLRC4P0CG21 123 aaPredicted RBP9.2□□□□□ -0.94
TPM4-212ENST00000590180 AKAIN1P0CW23 69 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 KLK9Q2XQG4 91 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 TRIM16LQ309B1 348 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 SP6Q3SY56 376 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 GPHB5Q86YW7 130 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 GDPD1Q8N9F7 314 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 OR13C8Q8NGS7 320 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 OR5B3Q8NH48 314 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 KLK9Q9UKQ9 250 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 C14orf166Q9Y224 244 aaKnown RBP9.2□□□□□ -0.94
TPM4-212ENST00000590180 DMRT1Q9Y5R6 373 aa9.2□□□□□ -0.94
TPM4-212ENST00000590180 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 TEX13DA0A0J9YY54 714 aaPredicted RBP9.19□□□□□ -0.94
TPM4-212ENST00000590180 DBX1A6NMT0 343 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 C15orf61A6NNL5 157 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 ATG12O94817 140 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 CTSDP07339 412 aaPredicted RBP9.19□□□□□ -0.94
TPM4-212ENST00000590180 IZUMO4Q1ZYL8 232 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 PLET1Q6UQ28 207 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 OR4C16Q8NGL9 310 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 DYNLRB2Q8TF09 96 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 CCDC140Q96MF4 163 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 TP53RKQ96S44 253 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
TPM4-212ENST00000590180 F11RQ9Y624 299 aaKnown RBP9.19□□□□□ -0.94
TPM4-212ENST00000590180 IGHV3-35A0A0C4DH35 117 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 GSTZ1O43708 216 aaPredicted RBP9.18□□□□□ -0.94
TPM4-212ENST00000590180 FOLR2P14207 255 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 GPR183P32249 361 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 S100A5P33763 92 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 AKR1C2P52895 323 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 HSPE1P61604 102 aaKnown RBP9.18□□□□□ -0.94
TPM4-212ENST00000590180 ERHP84090 104 aaKnown RBP9.18□□□□□ -0.94
TPM4-212ENST00000590180 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 OR51S1Q8NGJ8 323 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 OR1L6Q8NGR2 347 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 RNASE11Q8TAA1 199 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms