RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 GMPPBQ9Y5P6 360 aa4.42□□□□□ -1.7
TPM4-210ENST00000588507 HLA-DRB4X5D2U9 266 aa4.42□□□□□ -1.7
TPM4-210ENST00000588507 A0A087WXM4 84 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 NAPSAO96009 420 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 RRASP10301 218 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 FCGR1AP12314 374 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 TSPOP30536 169 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 AQP4P55087 323 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 TSPAN14Q8NG11 270 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 TNFAIP8L1Q8WVP5 186 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 NRBF2Q96F24 287 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 KCTD14Q9BQ13 255 aaPredicted RBP4.41□□□□□ -1.7
TPM4-210ENST00000588507 GINS3Q9BRX5 216 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 C11orf54Q9H0W9 315 aaPredicted RBP4.41□□□□□ -1.7
TPM4-210ENST00000588507 SPACA1Q9HBV2 294 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 ARMC1Q9NVT9 282 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 ABRACLQ9P1F3 81 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 RSL24D1Q9UHA3 163 aaKnown RBP4.41□□□□□ -1.7
TPM4-210ENST00000588507 CLEC2DQ9UHP7 191 aa4.41□□□□□ -1.7
TPM4-210ENST00000588507 PAIP2BQ9ULR5 123 aaKnown RBP4.41□□□□□ -1.7
TPM4-210ENST00000588507 RCL1Q9Y2P8 373 aaKnown RBP4.41□□□□□ -1.7
TPM4-210ENST00000588507 SAMHD1Q9Y3Z3 626 aaKnown RBP4.41□□□□□ -1.7
TPM4-210ENST00000588507 PLAC8L1A1L4L8 177 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 BBIP1A8MTZ0 92 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 J3QRK9 145 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 LECT2O14960 151 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 PRM2P04554 102 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 HNRNPCP07910 306 aaKnown RBP eCLIP4.4□□□□□ -1.71
TPM4-210ENST00000588507 CTSGP08311 255 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 MRPL3P09001 348 aaKnown RBP4.4□□□□□ -1.71
TPM4-210ENST00000588507 CFC1BP0CG36 223 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 UBCP0CG48 685 aaKnown RBP4.4□□□□□ -1.71
TPM4-210ENST00000588507 SAA1P0DJI8 122 aaPredicted RBP4.4□□□□□ -1.71
TPM4-210ENST00000588507 CRHBPP24387 322 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 CXCR4P61073 352 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 DHRS2Q13268 280 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 TPBGQ13641 420 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 Q56UQ5 140 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 YIF1BQ5BJH7 314 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 MORN5Q5VZ52 161 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 FAM220AQ7Z4H9 259 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 GPR141Q7Z602 305 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 ZNF709Q8N972 641 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 OR2T12Q8NG77 320 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 OR8J3Q8NGG0 315 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 CCDC124Q96CT7 223 aaKnown RBP4.4□□□□□ -1.71
TPM4-210ENST00000588507 MISP3Q96FF7 219 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 CNBD2Q96M20 576 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 GID8Q9NWU2 228 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 C21orf62Q9NYP8 219 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 EXOGQ9Y2C4 368 aaKnown RBP4.4□□□□□ -1.71
TPM4-210ENST00000588507 NEBP20929 6669 aa4.4□□□□□ -1.71
TPM4-210ENST00000588507 TRAV26-2A0A0B4J265 109 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 A0A1W2PQL4 384 aaPredicted RBP4.39□□□□□ -1.71
TPM4-210ENST00000588507 CGB1A6NKQ9 187 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 CYB5BO43169 146 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 CST1P01037 141 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 HOXB6P17509 224 aaKnown RBP4.39□□□□□ -1.71
TPM4-210ENST00000588507 SNRPD3P62318 126 aaKnown RBP4.39□□□□□ -1.71
TPM4-210ENST00000588507 HMGN3Q15651 99 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 KCTD21Q4G0X4 260 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 KDM4DQ6B0I6 523 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 RAB12Q6IQ22 244 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 LYPD5Q6UWN5 251 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 WFDC10BQ8IUB3 73 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 ZBTB8BQ8NAP8 495 aaPredicted RBP4.39□□□□□ -1.71
TPM4-210ENST00000588507 OSR1Q8TAX0 266 aaPredicted RBP4.39□□□□□ -1.71
TPM4-210ENST00000588507 BORCS5Q969J3 196 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 CPNE2Q96FN4 548 aaPredicted RBP4.39□□□□□ -1.71
TPM4-210ENST00000588507 VSIG2Q96IQ7 327 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 GPER1Q99527 375 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 HOPXQ9BPY8 73 aaPredicted RBP4.39□□□□□ -1.71
TPM4-210ENST00000588507 EBF4Q9BQW3 602 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 C9orf16Q9BUW7 83 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 JAM3Q9BX67 310 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 METTL9Q9H1A3 318 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 SLC35B3Q9H1N7 401 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 Q9HAA7 133 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 KLK11Q9UBX7 282 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 RPH3ALQ9UNE2 315 aa4.39□□□□□ -1.71
TPM4-210ENST00000588507 IGHV3-21A0A0B4J1V1 117 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 UBE2QL1A1L167 161 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 AQP12BA6NM10 295 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 GABRPO00591 440 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 OGG1O15527 345 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 SC5DO75845 299 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 CCNKO75909 580 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 CDRT1O95170 752 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 CRYZL1O95825 349 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 SMIM18P0DKX4 95 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 TNFSF8P32971 234 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 CEACAM6P40199 344 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 PAX9P55771 341 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 PSME3P61289 254 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 SNRPGP62308 76 aaKnown RBP4.38□□□□□ -1.71
TPM4-210ENST00000588507 MRPS15P82914 257 aaKnown RBP4.38□□□□□ -1.71
TPM4-210ENST00000588507 TMEM244Q5VVB8 128 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 DHFR2Q86XF0 187 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms