RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 AMY1AP04745 511 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 FOSL1P15407 271 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 MAS1LP35410 378 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 RPL27AP46776 148 aaKnown RBP8.97□□□□□ -0.97
VMP1-207ENST00000588131 P2RY1P47900 373 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 HOXA1P49639 335 aaPredicted RBP8.97□□□□□ -0.97
VMP1-207ENST00000588131 Q71RC1 249 aaPredicted RBP8.97□□□□□ -0.97
VMP1-207ENST00000588131 SMIM8Q96KF7 97 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 OR4C12Q96R67 309 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 HSPB9Q9BQS6 159 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 PLEKHA3Q9HB20 300 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 TNFRSF19Q9NS68 423 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 PSENENQ9NZ42 101 aa8.97□□□□□ -0.97
VMP1-207ENST00000588131 HOXA3O43365 443 aaPredicted RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 ACTL6BO94805 426 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 HLA-DRB1P01911 266 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 HNF1AP20823 631 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 CAV2P51636 162 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 AP2S1P53680 142 aaPredicted RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 TAS2R30P59541 319 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 RPL23AP62750 156 aaKnown RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 CX3CL1P78423 397 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 NDPQ00604 133 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 TMEM267Q0VDI3 215 aaPredicted RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 SPANXN5Q5MJ07 72 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 OR2C3Q8N628 320 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 TMEM252Q8N6L7 170 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 SRSF12Q8WXF0 261 aaKnown RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 BSCL2Q96G97 398 aaPredicted RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 AQP10Q96PS8 301 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 RASL11BQ9BPW5 248 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 FAM103A1Q9BTL3 118 aaKnown RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 MFFQ9GZY8 342 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 HEYLQ9NQ87 328 aaPredicted RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 LYRM2Q9NU23 88 aaPredicted RBP8.96□□□□□ -0.98
VMP1-207ENST00000588131 CACFD1Q9UGQ2 172 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 PITPNC1Q9UKF7 332 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 WSB1Q9Y6I7 421 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 ZANQ9Y493 2812 aa8.96□□□□□ -0.98
VMP1-207ENST00000588131 MAP1AP78559 2803 aaPredicted RBP8.95□□□□□ -0.98
VMP1-207ENST00000588131 IGHV7-81A0A0B4J1V7 117 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 IGLC7A0M8Q6 106 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 C15orf62A8K5M9 175 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 FGF16O43320 207 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 GPR137BO60478 399 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 TSC22D2O75157 780 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 CNIH1O95406 144 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 APELAP0DMC3 54 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 RPL12P30050 165 aaKnown RBP8.95□□□□□ -0.98
VMP1-207ENST00000588131 EWSR1Q01844 656 aaKnown RBP eCLIP8.95□□□□□ -0.98
VMP1-207ENST00000588131 WT1-ASQ06250 92 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 FXYD3Q14802 87 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 ACOT7LQ6ZUV0 252 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 INO80EQ8NBZ0 244 aaPredicted RBP8.95□□□□□ -0.98
VMP1-207ENST00000588131 OR5R1Q8NH85 324 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 TMEM170AQ8WVE7 144 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 ARPC1AQ92747 370 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 CIB3Q96Q77 187 aaPredicted RBP8.95□□□□□ -0.98
VMP1-207ENST00000588131 HIPK2Q9H2X6 1198 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 ENY2Q9NPA8 101 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 VPREB3Q9UKI3 123 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 FBXO7Q9Y3I1 522 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 HSPB11Q9Y547 144 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 ZFHX3Q15911 3703 aa8.95□□□□□ -0.98
VMP1-207ENST00000588131 OTOGQ6ZRI0 2925 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 A0A1W2PN81 502 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 BTBD17A6NE02 478 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 LINC01548A6NM66 108 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 INS-IGF2F8WCM5 200 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 REG1AP05451 166 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 METTL15P1P0C7V9 234 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 AREGP15514 252 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 CHRNA7P36544 502 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 NUP62P37198 522 aaPredicted RBP8.94□□□□□ -0.98
VMP1-207ENST00000588131 NHLH2Q02577 135 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 OR2F1Q13607 317 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 ZNF345Q14585 488 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 TMEM14EPQ6UXP3 125 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 ZNF562Q6V9R5 426 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 TMUB2Q71RG4 321 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 C16orf82Q7Z2V1 217 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 HAPLN4Q86UW8 402 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 KCNRGQ8N5I3 272 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 SSMEM1Q8WWF3 244 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 DUX5Q96PT3 197 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 ZC4H2Q9NQZ6 224 aa8.94□□□□□ -0.98
VMP1-207ENST00000588131 PAIP2BQ9ULR5 123 aaKnown RBP8.94□□□□□ -0.98
VMP1-207ENST00000588131 CSPG4Q6UVK1 2322 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 PMS2P5A8MQ11 134 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 INAFM1C9JVW0 142 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 CST7O76096 145 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 IFNA10P01566 189 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 OR13C7P0DN81 318 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 RNASE2P10153 161 aaKnown RBP8.93□□□□□ -0.98
VMP1-207ENST00000588131 EGR2P11161 476 aaPredicted RBP8.93□□□□□ -0.98
VMP1-207ENST00000588131 BLCAPP62952 87 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 ARL16Q0P5N6 197 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 BSXQ3C1V8 233 aa8.93□□□□□ -0.98
VMP1-207ENST00000588131 ASPHD1Q5U4P2 390 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms