RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TRAV3A0A0B4J244 114 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 TM4SF5O14894 197 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 CA2P00918 260 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 OR4A8P0C604 315 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 GLRXP35754 106 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 MRPS11P82912 194 aaKnown RBP15.29■□□□□ 0.04
DDX39A-206ENST00000587730 C1orf159Q96HA4 380 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 OR2V2Q96R30 315 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 MRPL18Q9H0U6 180 aaKnown RBP15.29■□□□□ 0.04
DDX39A-206ENST00000587730 IDI2-AS1Q9NZ38 188 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 OR51B2Q9Y5P1 312 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 AHCTF1Q8WYP5 2266 aa15.29■□□□□ 0.04
DDX39A-206ENST00000587730 PGPEP1LA6NFU8 196 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 CGAP01215 116 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 NDUFB7P17568 137 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 BMP5P22003 454 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 GNG4P50150 75 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 NUTF2P61970 127 aaKnown RBP15.28■□□□□ 0.04
DDX39A-206ENST00000587730 PRCDQ00LT1 54 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 CT45A1Q5HYN5 189 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 TMEM256Q8N2U0 113 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 OR4P4Q8NGL7 312 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 CT45A3Q8NHU0 189 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 SEPSECSQ9HD40 501 aaKnown RBP15.28■□□□□ 0.04
DDX39A-206ENST00000587730 OSTCQ9NRP0 149 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 DKK4Q9UBT3 224 aa15.28■□□□□ 0.04
DDX39A-206ENST00000587730 SAA2-SAA4A0A096LPE2 208 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 TNFSF13O75888 250 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 SAA2P0DJI9 122 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-206ENST00000587730 SELENOVP59797 346 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 C17orf58Q2M2W7 97 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 TIMM23BQ5SRD1 257 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 MMD2Q8IY49 270 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 OR1L6Q8NGR2 347 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 STARD4Q96DR4 205 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 C20orf144Q9BQM9 153 aa15.27■□□□□ 0.04
DDX39A-206ENST00000587730 PTPRBP23467 1997 aa15.27■□□□□ 0.03
DDX39A-206ENST00000587730 HELTA6NFD8 242 aa15.27■□□□□ 0.03
DDX39A-206ENST00000587730 RNF224P0DH78 156 aa15.27■□□□□ 0.03
DDX39A-206ENST00000587730 HOXA4Q00056 320 aaPredicted RBP15.27■□□□□ 0.03
DDX39A-206ENST00000587730 TIGITQ495A1 244 aa15.27■□□□□ 0.03
DDX39A-206ENST00000587730 MOGAT3Q86VF5 341 aa15.27■□□□□ 0.03
DDX39A-206ENST00000587730 OR5B3Q8NH48 314 aa15.27■□□□□ 0.03
DDX39A-206ENST00000587730 MRPL32Q9BYC8 188 aaKnown RBP15.27■□□□□ 0.03
DDX39A-206ENST00000587730 POLR3KQ9Y2Y1 108 aaPredicted RBP15.27■□□□□ 0.03
DDX39A-206ENST00000587730 MBD3L4A6NDZ8 208 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-206ENST00000587730 MBD3L3A6NE82 208 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-206ENST00000587730 MBD3L5A6NJ08 208 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-206ENST00000587730 K7EN84 100 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 LINC00869P0C866 280 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 CCL11P51671 97 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 PRSS8Q16651 343 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 C2orf83Q53S99 150 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 ZNRF1Q8ND25 227 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 ZNF439Q8NDP4 499 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 FDCSPQ8NFU4 85 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 MBD3L2Q8NHZ7 208 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-206ENST00000587730 RNF7Q9UBF6 113 aa15.26■□□□□ 0.03
DDX39A-206ENST00000587730 DCHS1Q96JQ0 3298 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 IGLV3-9A0A075B6K5 115 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 A0A1W2PRE2 83 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 ZNF705FA8MVS1 300 aaPredicted RBP15.25■□□□□ 0.03
DDX39A-206ENST00000587730 J3QR06 171 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 UPK2O00526 184 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 FCN1O00602 326 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 ZNF705DP0CH99 300 aaPredicted RBP15.25■□□□□ 0.03
DDX39A-206ENST00000587730 ZNF705BP0CI00 300 aaPredicted RBP15.25■□□□□ 0.03
DDX39A-206ENST00000587730 TMEM183BQ1AE95 376 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 OR1L8Q8NGR8 309 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 NABP2Q9BQ15 211 aa15.25■□□□□ 0.03
DDX39A-206ENST00000587730 IGHV3OR15-7A0A075B7D8 119 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 ISLRO14498 428 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 TCAPO15273 167 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 SNRPCP09234 159 aaKnown RBP15.24■□□□□ 0.03
DDX39A-206ENST00000587730 CBLN1P23435 193 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 OR10J3Q5JRS4 329 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 TEX43Q6ZNM6 134 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 TCF23Q7RTU1 214 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 BAGE3Q86Y29 109 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 BAGE2Q86Y30 109 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 OR5AU1Q8NGC0 362 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 CACNG8Q8WXS5 425 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 PLPPR2Q96GM1 343 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 TBX15Q96SF7 602 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 BET1LQ9NYM9 111 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 V9GYV3 84 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 MED13Q9UHV7 2174 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 DOCK7Q96N67 2140 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 OR5G3P0C626 314 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 IGFBP2P18065 325 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 RAB4AP20338 218 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 TNFSF4P23510 183 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 CX3CL1P78423 397 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 PSG5Q15238 335 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 TGIF2LXQ8IUE1 241 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 LYG1Q8N1E2 194 aa15.24■□□□□ 0.03
DDX39A-206ENST00000587730 HLA-DRB5Q30154 266 aa15.23■□□□□ 0.03
DDX39A-206ENST00000587730 CENPWQ5EE01 88 aa15.23■□□□□ 0.03
DDX39A-206ENST00000587730 SPATA31B1PQ5VZV4 182 aa15.23■□□□□ 0.03
DDX39A-206ENST00000587730 NEU1Q99519 415 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms