RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 RFX2P48378 723 aa11.3□□□□□ -0.6
PRKCSH-204ENST00000587290 DEFB135Q30KP9 77 aa11.3□□□□□ -0.6
PRKCSH-204ENST00000587290 GDPD1Q8N9F7 314 aa11.3□□□□□ -0.6
PRKCSH-204ENST00000587290 ZBTB34Q8NCN2 500 aa11.3□□□□□ -0.6
PRKCSH-204ENST00000587290 OR5AP2Q8NGF4 316 aa11.3□□□□□ -0.6
PRKCSH-204ENST00000587290 TMEM190Q8WZ59 177 aa11.3□□□□□ -0.6
PRKCSH-204ENST00000587290 CHRDL1Q9BU40 450 aa11.3□□□□□ -0.6
PRKCSH-204ENST00000587290 PMP2P02689 132 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 PTBP1P26599 531 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 HERV-K104P61576 105 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 UBAC2Q8NBM4 344 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 GIMAP1Q8WWP7 306 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 ZNF436Q9C0F3 470 aaPredicted RBP11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 FXYD6Q9H0Q3 95 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 PLEKHA2Q9HB19 425 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 DIABLOQ9NR28 239 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 MRPL27Q9P0M9 148 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 UFC1Q9Y3C8 167 aa11.29□□□□□ -0.6
PRKCSH-204ENST00000587290 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 DBX1A6NMT0 343 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 MARCH11A6NNE9 402 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 F8W735 103 aaPredicted RBP11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 KRASP01116 189 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 SERPINE2P07093 398 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 TRAPPC2P0DI81 140 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 TRAPPC2BP0DI82 140 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 G6PCP35575 357 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 SCAND1P57086 179 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 ANKRD55Q3KP44 614 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 ODF3L2Q3SX64 289 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 OR2C3Q8N628 320 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 FCAMRQ8WWV6 532 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 LINC00476Q8WZB0 136 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 MARC2Q969Z3 335 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 AIFM2Q9BRQ8 373 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 ZNF2Q9BSG1 426 aaPredicted RBP11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 C20orf24Q9BUV8 137 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 COMMD9Q9P000 198 aa11.28□□□□□ -0.6
PRKCSH-204ENST00000587290 KMT2AQ03164 3969 aa11.27□□□□□ -0.6
PRKCSH-204ENST00000587290 A0A0A6YYH2 397 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 TRAV25A0A0B4J276 109 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 A6NJ64 397 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 ADMP35318 185 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 LPAR6P43657 344 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 ERVK-16P61578 105 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 ZNF124Q15973 351 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 LYG2Q86SG7 212 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 C5orf66Q9H5L9 145 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 THYN1Q9P016 225 aa11.27□□□□□ -0.61
PRKCSH-204ENST00000587290 IGHV3-49A0A0A0MS15 119 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 K7EIM0 57 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 XRCC3O43542 346 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 LY6G6CO95867 125 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 CBX5P45973 191 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 ELLP55199 621 aaPredicted RBP11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 TAS2R20P59543 309 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 LSM3P62310 102 aaKnown RBP11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 OR1L8Q8NGR8 309 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 SCARB1Q8WTV0 552 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 MOB3AQ96BX8 217 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 SPAG8Q99932 426 aaPredicted RBP11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 Q9H521 79 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 NDUFA4L2Q9NRX3 87 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 OR51B2Q9Y5P1 312 aa11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 F11RQ9Y624 299 aaKnown RBP11.26□□□□□ -0.61
PRKCSH-204ENST00000587290 TSPAN4O14817 238 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 SPRY2O43597 315 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 IGHV3-48P01763 117 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 F2RP25116 425 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 PHLDA2Q53GA4 152 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 Q56UQ5 140 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 APRG1Q8IVJ8 170 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 SAMD12Q8N8I0 201 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 OR5B3Q8NH48 314 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 CD300LFQ8TDQ1 290 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 LSM10Q969L4 123 aaKnown RBP11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 DGCR14Q96DF8 476 aaKnown RBP11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 BSCL2Q96G97 398 aaPredicted RBP11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 YTHDF1Q9BYJ9 559 aaKnown RBP11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
PRKCSH-204ENST00000587290 IGKV3-7A0A075B6H7 116 aa11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 APOC4P55056 127 aa11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 UBE2NLQ5JXB2 153 aa11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 TMEM69Q5SWH9 247 aa11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 SLC38A6Q8IZM9 456 aa11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 OR5H2Q8NGV7 314 aa11.24□□□□□ -0.61
PRKCSH-204ENST00000587290 IGHV3OR16-13A0A075B7E8 117 aa11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 IGHV3-74A0A0B4J1X5 117 aa11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 NDUFA4O00483 81 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 791.1 ms