RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	KCTD9	Q7L273	389 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	MOB1B	Q7L9L4	216 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	ZNF546	Q86UE3	836 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	SLC51B	Q86UW2	128 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	KCNRG	Q8N5I3	272 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	RPP25L	Q8N5L8	163 aa	Known RBP	11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	ADAD2	Q8NCV1	583 aa	Known RBP	11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	NPB	Q8NG41	125 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	CT45A3	Q8NHU0	189 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	ABHD5	Q8WTS1	349 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	TMEM230	Q96A57	120 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	MOB3A	Q96BX8	217 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	PDCD10	Q9BUL8	212 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	PLEKHA3	Q9HB20	300 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	MED9	Q9NWA0	146 aa		11.18	□□□□□ -0.62
RANBP3-208	ENST00000587263	CRYM-AS1	A6NIL9	109 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	SPINT2	O43291	252 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	OR7C1	O76099	320 aa	Predicted RBP	11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	PET100	P0DJ07	73 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	PGAM2	P15259	253 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	PSMB6	P28072	239 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	ZNF134	P52741	427 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	SUPT4H1	P63272	117 aa	Known RBP	11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	CX3CL1	P78423	397 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	PMS2P11	Q13670	270 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	ZNF880	Q6PDB4	577 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	GAPT	Q8N292	157 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	CCDC71L	Q8N9Z2	235 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	THAP6	Q8TBB0	222 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	PHYHIPL	Q96FC7	376 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	RITA1	Q96K30	269 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	MS4A10	Q96PG2	267 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	MFF	Q9GZY8	342 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263		Q9N2K0	584 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	TNFSF18	Q9UNG2	199 aa		11.17	□□□□□ -0.62
RANBP3-208	ENST00000587263	SIX6	O95475	246 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	HTR2B	P41595	481 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	CD81	P60033	236 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	RND3	P61587	244 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	KLF5	Q13887	457 aa	Predicted RBP	11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	UNQ5815/PRO19632	Q6UWF5	114 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	IL34	Q6ZMJ4	242 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	SLC7A5P1	Q8MH63	180 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	OR10V1	Q8NGI7	309 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	C2orf50	Q96LR7	162 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	SIGLEC8	Q9NYZ4	499 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	HECTD4	Q9Y4D8	3996 aa		11.16	□□□□□ -0.62
RANBP3-208	ENST00000587263	TRAV14DV4	A0A0A6YYC5	116 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	TRDC	B7Z8K6	153 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	ARPC5	O15511	151 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	MPC2	O95563	127 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	IFNA21	P01568	189 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	TRGV3	P03979	118 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	IL15RA	Q13261	267 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	PLGLA	Q15195	96 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	AKIRIN2	Q53H80	203 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	ZNF497	Q6ZNH5	498 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	PPP1R27	Q86WC6	154 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	OR4A4P	Q8NGN8	299 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	OR2K2	Q8NGT1	345 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	NEK7	Q8TDX7	302 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	SCARB1	Q8WTV0	552 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	PPP1R1C	Q8WVI7	109 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	WDR89	Q96FK6	387 aa	Predicted RBP	11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	MRPL20	Q9BYC9	149 aa	Known RBP	11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	ZNF581	Q9P0T4	197 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	KIAA1109	Q2LD37	5005 aa		11.15	□□□□□ -0.62
RANBP3-208	ENST00000587263	IGKV1D-8	A0A087WSZ0	117 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	FXYD6-FXYD2	A0A087WZ82	144 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	DUXB	A0A1W2PPF3	345 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	C5orf51	A6NDU8	294 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	TUSC2	O75896	110 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	EGR2	P11161	476 aa	Predicted RBP	11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	HERV-K104	P61576	105 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	C6orf183	Q5T699	404 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	ARL6	Q9H0F7	186 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	FXYD6	Q9H0Q3	95 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	FBXL15	Q9H469	300 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	NAA60	Q9H7X0	242 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	TRAPPC2L	Q9UL33	140 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	KLK5	Q9Y337	293 aa	Predicted RBP	11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263	KMT2A	Q03164	3969 aa		11.14	□□□□□ -0.63
RANBP3-208	ENST00000587263		A0A0G2JLM5	398 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	C13orf42	A0A1B0GVH6	325 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	IZUMO1R	A6ND01	250 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	RRH	O14718	337 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	TSC22D2	O75157	780 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	HBZ	P02008	142 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	S100G	P29377	79 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	FCGR2C	P31995	323 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	NUP62	P37198	522 aa	Predicted RBP	11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	SYNJ2BP	P57105	145 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	EIF5A	P63241	154 aa	Known RBP	11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	EXOSC2	Q13868	293 aa	Known RBP	11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	PRSS54	Q6PEW0	395 aa		11.13	□□□□□ -0.63
RANBP3-208	ENST00000587263	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms