RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RAMP3O60896 148 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 RBMXL2O75526 392 aaKnown RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 TSPAN9O75954 239 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 CFDP00746 253 aaPredicted RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 KRASP01116 189 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 IGKV1-39P01597 117 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 OPN1MWP04001 364 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 IGKV1D-39P04432 117 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 SEC11BP0C7V7 166 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 P0C879 139 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 OPN1MW2P0DN77 364 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 OPN1MW3P0DN78 364 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 MC5RP33032 325 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 SAA4P35542 130 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 GNG10P50151 68 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 SULT1A1P50225 295 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 UBE2KP61086 200 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 POLR2GP62487 172 aaKnown RBP eCLIP6.27□□□□□ -1.41
VMP1-204ENST00000587259 RPL30P62888 115 aaKnown RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 EWSR1Q01844 656 aaKnown RBP eCLIP6.27□□□□□ -1.41
VMP1-204ENST00000587259 TNFRSF9Q07011 255 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 CXorf66Q5JRM2 361 aaPredicted RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 KPRPQ5T749 579 aaPredicted RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 NCR3LG1Q68D85 454 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 ZNF429Q86V71 674 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 PDPNQ86YL7 162 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 TMEM252Q8N6L7 170 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 KLHDC1Q8N7A1 406 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 BEND2Q8NDZ0 799 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 OR1S2Q8NGQ3 325 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 OR4A16Q8NH70 328 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 DDB2Q92466 427 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 GNPNAT1Q96EK6 184 aaPredicted RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 SAT2Q96F10 170 aaPredicted RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 C5orf30Q96GV9 206 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 GPHA2Q96T91 129 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 TSNAXQ99598 290 aaKnown RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 TMEM133Q9H2Q1 129 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 C11orf1Q9H5F2 150 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 TPSG1Q9NRR2 321 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 AURKAIP1Q9NWT8 199 aaPredicted RBP6.27□□□□□ -1.41
VMP1-204ENST00000587259 FKBP11Q9NYL4 201 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 UMAD1C9J7I0 102 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 H3BUX3 64 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 J3QR06 171 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 CHST1O43916 411 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 SOX15O60248 233 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 IFNA5P01569 189 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 NMBP08949 121 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 CCL3L1P16619 93 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 G6PCP35575 357 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 ZNF134P52741 427 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 DLX6P56179 175 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 ATP5IP56385 69 aaPredicted RBP6.26□□□□□ -1.41
VMP1-204ENST00000587259 SPCS3P61009 180 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 RPL15P61313 204 aaKnown RBP6.26□□□□□ -1.41
VMP1-204ENST00000587259 BLOC1S1P78537 153 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 ATP6V1FQ16864 119 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 RPL39P5Q59GN2 51 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 OR2B11Q5JQS5 317 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 MRPL41Q8IXM3 137 aaKnown RBP6.26□□□□□ -1.41
VMP1-204ENST00000587259 ODF3L1Q8IXM7 274 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 PUSL1Q8N0Z8 303 aaKnown RBP6.26□□□□□ -1.41
VMP1-204ENST00000587259 OR4C13Q8NGP0 309 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 OR13D1Q8NGV5 346 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 OR4A5Q8NH83 315 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 PINX1Q96BK5 328 aaKnown RBP6.26□□□□□ -1.41
VMP1-204ENST00000587259 CLEC7AQ9BXN2 247 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 PARD6GQ9BYG4 376 aaPredicted RBP6.26□□□□□ -1.41
VMP1-204ENST00000587259 ARV1Q9H2C2 271 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 HIPK2Q9H2X6 1198 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 CYTL1Q9NRR1 136 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 SLC35D1Q9NTN3 355 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 PSENENQ9NZ42 101 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 PRNDQ9UKY0 176 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 ZNF257Q9Y2Q1 563 aa6.26□□□□□ -1.41
VMP1-204ENST00000587259 STRAPQ9Y3F4 350 aaKnown RBP6.26□□□□□ -1.41
VMP1-204ENST00000587259 A0A0G2JRQ6 117 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 BTBD17A6NE02 478 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 C15orf61A6NNL5 157 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 SLC31A2O15432 143 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 CRYZL1O95825 349 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 FBP1P09467 338 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 CD28P10747 220 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 CEACAM3P40198 252 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 HCP5Q6MZN7 132 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 SLC25A24Q6NUK1 477 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 COMMD7Q86VX2 200 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 TGIF2LXQ8IUE1 241 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 ABHD12Q8N2K0 398 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 EIF4E3Q8N5X7 224 aaKnown RBP6.25□□□□□ -1.41
VMP1-204ENST00000587259 LY6G5BQ8NDX9 201 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 OR5AN1Q8NGI8 311 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 OR5C1Q8NGR4 320 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 DTD1Q8TEA8 209 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 AJUBAQ96IF1 538 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 RHOVQ96L33 236 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 ATP5SQ99766 215 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 ZNF251Q9BRH9 671 aa6.25□□□□□ -1.41
VMP1-204ENST00000587259 GINS3Q9BRX5 216 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms