RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 ATP6V0BQ99437 205 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 OVOL2Q9BRP0 275 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 TP53TG1Q9Y2A0 90 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
VAPA-209ENST00000585042 CGB1A6NKQ9 187 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 HPGDSO60760 199 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 IGHV3-23P01764 117 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 MYOD1P15172 320 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 NQO2P16083 231 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 ELK1P19419 428 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 FCGR2CP31995 323 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 TAS2R46P59540 309 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 OR2B8PP59922 312 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 CATR1Q13166 79 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 RBPMS2Q6ZRY4 209 aaKnown RBP11.22□□□□□ -0.61
VAPA-209ENST00000585042 C19orf35Q6ZS72 473 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 HSD17B13Q7Z5P4 300 aaPredicted RBP11.22□□□□□ -0.61
VAPA-209ENST00000585042 SLC38A6Q8IZM9 456 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 SPAG16Q8N0X2 631 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 OR5AP2Q8NGF4 316 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 VN1R17PQ8TDU5 208 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 GIMAP1Q8WWP7 306 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 CACNG8Q8WXS5 425 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 BORCS5Q969J3 196 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 C5orf66Q9H5L9 145 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 HRASLSQ9HDD0 168 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 CCL28Q9NRJ3 127 aa11.22□□□□□ -0.61
VAPA-209ENST00000585042 SULT1C2O00338 296 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 UPK2O00526 184 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 UBE2CO00762 179 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 RGS5O15539 181 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 PPYP01298 95 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 PTHLHP12272 177 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 ATF4P18848 351 aaPredicted RBP11.21□□□□□ -0.61
VAPA-209ENST00000585042 SPCS2Q15005 226 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 TM4SF20Q53R12 229 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 PLET1Q6UQ28 207 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 Q6ZWC4 215 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 CADM3Q8N126 398 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 OR2C3Q8N628 320 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 ZNF502Q8TBZ5 544 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 SECTM1Q8WVN6 248 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 ZNF436Q9C0F3 470 aaPredicted RBP11.21□□□□□ -0.61
VAPA-209ENST00000585042 COMMD5Q9GZQ3 224 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 PLEKHA2Q9HB19 425 aa11.21□□□□□ -0.61
VAPA-209ENST00000585042 EPPK1P58107 5090 aaKnown RBP11.21□□□□□ -0.61
VAPA-209ENST00000585042 IGLC7A0M8Q6 106 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 MEIS3P1A6NDR6 274 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 CCDC160A6NGH7 325 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 SCAF4O95104 1147 aaKnown RBP11.2□□□□□ -0.62
VAPA-209ENST00000585042 HERV-K104P61576 105 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 ZNF585BQ52M93 769 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 BTNL8Q6UX41 500 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 SNX29P2Q8IUI4 249 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 OR5H2Q8NGV7 314 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
VAPA-209ENST00000585042 SLC5A7Q9GZV3 580 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
VAPA-209ENST00000585042 S4R3C0 116 aa11.2□□□□□ -0.62
VAPA-209ENST00000585042 TNFSF12O43508 249 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 REG1AP05451 166 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 FCER2P06734 321 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 BMI1P35226 326 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 APOC4P55056 127 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 TNFRSF9Q07011 255 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 SPSB3Q6PJ21 355 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 UNQ9165/PRO28630Q6UXU0 137 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 GPX8Q8TED1 209 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 GPHA2Q96T91 129 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 QTRT1Q9BXR0 403 aaKnown RBP11.19□□□□□ -0.62
VAPA-209ENST00000585042 EHFQ9NZC4 300 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 COMMD9Q9P000 198 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
VAPA-209ENST00000585042 EXTL2Q9UBQ6 330 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 RABL2BQ9UNT1 228 aa11.19□□□□□ -0.62
VAPA-209ENST00000585042 KIR2DL5BA0A0G2JN68 375 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 KIR2DL5BA0A0G2JPC4 375 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 TSPAN4O14817 238 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 TGOLN2O43493 480 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 SERPINE2P07093 398 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 TRAPPC2P0DI81 140 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 TRAPPC2BP0DI82 140 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 NAT1P18440 290 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 GPR183P32249 361 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 RCVRNP35243 200 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 LAMTOR1Q6IAA8 161 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 KIR2DL5AQ8N109 375 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 GDPD1Q8N9F7 314 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 KIR2DL5BQ8NHK3 375 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 DYNC2LI1Q8TCX1 351 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 BSCL2Q96G97 398 aaPredicted RBP11.18□□□□□ -0.62
VAPA-209ENST00000585042 ANAPC10Q9UM13 185 aa11.18□□□□□ -0.62
VAPA-209ENST00000585042 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
VAPA-209ENST00000585042 NUPR2A6NF83 97 aa11.17□□□□□ -0.62
VAPA-209ENST00000585042 H3BMQ9 156 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms