RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TBX6O95947 436 aaPredicted RBP11.03□□□□□ -0.64
RNF43-208ENST00000584437 CD5P06127 495 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 ACP7Q6ZNF0 438 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 IGKV3D-15A0A087WSY6 115 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 PGPEP1LA6NFU8 196 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 TMEM50AO95807 157 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 GNB1LQ9BYB4 327 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 RNASE1P07998 156 aaKnown RBP11.03□□□□□ -0.64
RNF43-208ENST00000584437 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 COLCA2A8K830 154 aa11.02□□□□□ -0.64
RNF43-208ENST00000584437 H0YIZ8 118 aa11.02□□□□□ -0.64
RNF43-208ENST00000584437 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.64
RNF43-208ENST00000584437 LDLRAD4O15165 306 aa11.02□□□□□ -0.64
RNF43-208ENST00000584437 ASIPP42127 132 aa11.02□□□□□ -0.64
RNF43-208ENST00000584437 ACSF3Q4G176 576 aaPredicted RBP11.02□□□□□ -0.64
RNF43-208ENST00000584437 PEAR1Q5VY43 1037 aaPredicted RBP11.02□□□□□ -0.64
RNF43-208ENST00000584437 TMEM144Q7Z5S9 345 aa11.02□□□□□ -0.64
RNF43-208ENST00000584437 HIST3H2BBQ8N257 126 aa11.02□□□□□ -0.64
RNF43-208ENST00000584437 PTPRFP10586 1907 aa11.02□□□□□ -0.64
RNF43-208ENST00000584437 ZNF638Q14966 1978 aaKnown RBP11.02□□□□□ -0.64
RNF43-208ENST00000584437 CCL21O00585 134 aa11.02□□□□□ -0.65
RNF43-208ENST00000584437 SUMO2P61956 95 aaKnown RBP11.02□□□□□ -0.65
RNF43-208ENST00000584437 MBD3L1Q8WWY6 194 aa11.02□□□□□ -0.65
RNF43-208ENST00000584437 MIR17HGQ75NE6 70 aa11.02□□□□□ -0.65
RNF43-208ENST00000584437 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.65
RNF43-208ENST00000584437 NPFFO15130 113 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 ATXN7O15265 892 aaPredicted RBP11.01□□□□□ -0.65
RNF43-208ENST00000584437 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 GDF15Q99988 308 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 TRBV6-7A0A0A0MS04 114 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 PATE3B3GLJ2 98 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 IGHV3-48P01763 117 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 SNRPD3P62318 126 aaKnown RBP11.01□□□□□ -0.65
RNF43-208ENST00000584437 SEC11AP67812 179 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 WBP1LQ9NX94 342 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 A0A1B0GW64 132 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 TNFSF13O75888 250 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 PTPRZ1P23471 2315 aaPredicted RBP11.01□□□□□ -0.65
RNF43-208ENST00000584437 TMEM262E9PQX1 116 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 GTF3AQ92664 365 aaKnown RBP11.01□□□□□ -0.65
RNF43-208ENST00000584437 MEGF9Q9H1U4 602 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 A0A1W2PRS3 328 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 PROB1E7EW31 1015 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 C1QTNF9P0C862 333 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 ID3Q02535 119 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 SLC25A28Q96A46 364 aa11.01□□□□□ -0.65
RNF43-208ENST00000584437 A0A1W2PRE2 83 aa11□□□□□ -0.65
RNF43-208ENST00000584437 APOMO95445 188 aa11□□□□□ -0.65
RNF43-208ENST00000584437 TYMSP04818 313 aa11□□□□□ -0.65
RNF43-208ENST00000584437 TIMM23BQ5SRD1 257 aa11□□□□□ -0.65
RNF43-208ENST00000584437 GLRX5Q86SX6 157 aa11□□□□□ -0.65
RNF43-208ENST00000584437 FAM90A1Q86YD7 464 aa11□□□□□ -0.65
RNF43-208ENST00000584437 SLC25A45Q8N413 288 aa11□□□□□ -0.65
RNF43-208ENST00000584437 SIGMAR1Q99720 223 aa11□□□□□ -0.65
RNF43-208ENST00000584437 ST20Q9HBF5 79 aa11□□□□□ -0.65
RNF43-208ENST00000584437 OTORQ9NRC9 128 aa11□□□□□ -0.65
RNF43-208ENST00000584437 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
RNF43-208ENST00000584437 IGKV1D-43A0A0B4J1Z2 117 aa11□□□□□ -0.65
RNF43-208ENST00000584437 H3BRM9 83 aa11□□□□□ -0.65
RNF43-208ENST00000584437 CLEC2AQ6UVW9 174 aa11□□□□□ -0.65
RNF43-208ENST00000584437 Q6ZT83 130 aa11□□□□□ -0.65
RNF43-208ENST00000584437 OR13C6PQ8NH95 151 aa11□□□□□ -0.65
RNF43-208ENST00000584437 ORAOV1Q8WV07 137 aa11□□□□□ -0.65
RNF43-208ENST00000584437 SPSB2Q99619 263 aa11□□□□□ -0.65
RNF43-208ENST00000584437 DICER1Q9UPY3 1922 aaKnown RBP11□□□□□ -0.65
RNF43-208ENST00000584437 FAM89BQ8N5H3 189 aa11□□□□□ -0.65
RNF43-208ENST00000584437 CHCHD1Q96BP2 118 aaKnown RBP11□□□□□ -0.65
RNF43-208ENST00000584437 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
RNF43-208ENST00000584437 J3QRE1 110 aa11□□□□□ -0.65
RNF43-208ENST00000584437 CEACAM4O75871 244 aa11□□□□□ -0.65
RNF43-208ENST00000584437 C2orf88Q9BSF0 95 aa11□□□□□ -0.65
RNF43-208ENST00000584437 SPTBP11277 2137 aa11□□□□□ -0.65
RNF43-208ENST00000584437 CTSBP07858 339 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 PNKDQ8N490 385 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 Q9H3A6 140 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 SFTPCP11686 197 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 ZNRF1Q8ND25 227 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 HBDP02042 147 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 LINC00614P0C842 121 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 GLRXP35754 106 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 STARD6P59095 220 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 BEND2Q8NDZ0 799 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 LOC105371242A0A075B767 164 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 M0R381 172 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 LDLRAD2Q5SZI1 272 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 NUDT11Q96G61 164 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 RNASE7Q9H1E1 156 aaKnown RBP10.99□□□□□ -0.65
RNF43-208ENST00000584437 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
RNF43-208ENST00000584437 ZNF703Q9H7S9 590 aaPredicted RBP10.99□□□□□ -0.65
RNF43-208ENST00000584437 IGKV3D-11A0A0A0MRZ8 115 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 PRR7Q8TB68 274 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 TNFRSF18Q9Y5U5 241 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 KBTBD11-OT1A0A1B0GTJ5 212 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 AMBPP02760 352 aa10.98□□□□□ -0.65
RNF43-208ENST00000584437 CCL1P22362 96 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms