RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 C5orf56Q8N8D9 126 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 Q8N9W7 124 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 NPBQ8NG41 125 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 STOML3Q8TAV4 291 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 SUN5Q8TC36 379 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 PCNPQ8WW12 178 aaKnown RBP8.7□□□□□ -1.02
TOP3A-216ENST00000583804 TAF15Q92804 592 aaKnown RBP eCLIP8.7□□□□□ -1.02
TOP3A-216ENST00000583804 RHOVQ96L33 236 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 CXorf58Q96LI9 332 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 C2orf50Q96LR7 162 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 HINT2Q9BX68 163 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 FAM212BQ9NTI7 297 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-216ENST00000583804 MMP24Q9Y5R2 645 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 FGF16O43320 207 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 SSSCA1O60232 199 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 SPDEFO95238 335 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 RLN2P04090 185 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 IAPPP10997 89 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 PJVKQ0ZLH3 352 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 RAB32Q13637 225 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 SMCO1Q147U7 214 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 ARSJQ5FYB0 599 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-216ENST00000583804 C10orf55Q5SWW7 151 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 PRIMA1Q86XR5 153 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 INO80EQ8NBZ0 244 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-216ENST00000583804 OR4A16Q8NH70 328 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 ARPC5LQ9BPX5 153 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 RCL1Q9Y2P8 373 aaKnown RBP8.7□□□□□ -1.02
TOP3A-216ENST00000583804 DUXBA0A1W2PPF3 345 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 ST8SIA3O43173 380 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 ATG12O94817 140 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 NDUFA3O95167 84 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 MBPP02686 304 aaPredicted RBP8.69□□□□□ -1.02
TOP3A-216ENST00000583804 AMY1AP04745 511 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 APELAP0DMC3 54 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 POLR2GP62487 172 aaKnown RBP eCLIP8.69□□□□□ -1.02
TOP3A-216ENST00000583804 IL15RAQ13261 267 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 Q6ZS46 218 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 FAM71E2Q8N5Q1 922 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 TEX45Q8NA69 505 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 OR4D5Q8NGN0 318 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 VSTM2AQ8TAG5 236 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 LSM10Q969L4 123 aaKnown RBP8.69□□□□□ -1.02
TOP3A-216ENST00000583804 SPIN2AQ99865 258 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 SPIN2BQ9BPZ2 258 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 PRSS22Q9GZN4 317 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 MBD2Q9UBB5 411 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 SIGLEC9Q9Y336 463 aa8.69□□□□□ -1.02
TOP3A-216ENST00000583804 H3BP45 60 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 FCN1O00602 326 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 ACTL6BO94805 426 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 KBTBD11O94819 623 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 CNIH1O95406 144 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 CA2P00918 260 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 CRYGBP07316 175 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 P0C879 139 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 PET100P0DJ07 73 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 NUP62P37198 522 aaPredicted RBP8.68□□□□□ -1.02
TOP3A-216ENST00000583804 RPL15P61313 204 aaKnown RBP8.68□□□□□ -1.02
TOP3A-216ENST00000583804 PRSS54Q6PEW0 395 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 PPP1R27Q86WC6 154 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 ZNF430Q9H8G1 570 aaPredicted RBP8.68□□□□□ -1.02
TOP3A-216ENST00000583804 OR5AC2Q9NZP5 309 aa8.68□□□□□ -1.02
TOP3A-216ENST00000583804 A0A1B0GU03 582 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 K7EPK0 472 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 WRBO00258 174 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 UPK2O00526 184 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 IFNA17P01571 189 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 NKX2-1P43699 371 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-216ENST00000583804 RELBQ01201 579 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 TNXAQ16473 311 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 PRSS8Q16651 343 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 Q6ZSV7 163 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 PUSL1Q8N0Z8 303 aaKnown RBP8.67□□□□□ -1.02
TOP3A-216ENST00000583804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-216ENST00000583804 ABHD5Q8WTS1 349 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 DCUN1D4Q92564 292 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 AQP10Q96PS8 301 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 HSPB9Q9BQS6 159 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 RNF126Q9BV68 326 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 ZNF471Q9BX82 626 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-216ENST00000583804 RBKSQ9H477 322 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 OR51B2Q9Y5P1 312 aa8.67□□□□□ -1.02
TOP3A-216ENST00000583804 PIGBOS1A0A0B4J2F0 54 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 CEBPZOSA8MTT3 80 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 H0YIZ8 118 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 HLA-DRB1P01911 266 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 TPT1P13693 172 aaKnown RBP8.66□□□□□ -1.02
TOP3A-216ENST00000583804 HOXA1P49639 335 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-216ENST00000583804 CX3CL1P78423 397 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 ZNF562Q6V9R5 426 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 SLC35E3Q7Z769 313 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 MMD2Q8IY49 270 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 STPG2Q8N412 459 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 OR4A5Q8NH83 315 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 OR2T6Q8NHC8 308 aa8.66□□□□□ -1.02
TOP3A-216ENST00000583804 TMEM167AQ8TBQ9 72 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms